Differences in Medium-Induced Conformational Plasticity Presumably Underlie Different Cytotoxic Activity of Ricin and Viscumin.

medium effects on protein structure membrane trafficking of proteins molecular dynamics protein–membrane interactions type II ribosome inactivating proteins

Journal

Biomolecules
ISSN: 2218-273X
Titre abrégé: Biomolecules
Pays: Switzerland
ID NLM: 101596414

Informations de publication

Date de publication:
11 02 2022
Historique:
received: 04 01 2022
revised: 04 02 2022
accepted: 08 02 2022
entrez: 25 2 2022
pubmed: 26 2 2022
medline: 5 4 2022
Statut: epublish

Résumé

Structurally similar catalytic subunits A of ricin (RTA) and viscumin (MLA) exhibit cytotoxic activity through ribosome inactivation. Ricin is more cytotoxic than viscumin, although the molecular mechanisms behind this difference are still poorly understood. To shed more light on this problem, we used a combined biochemical/molecular modeling approach to assess possible relationships between the activity of toxins and their structural/dynamic properties. Based on bioassay measurements, it was suggested that the differences in activity are associated with the ability of RTA and MLA to undergo structural/hydrophobic rearrangements during trafficking through the endoplasmic reticulum (ER) membrane. Molecular dynamics simulations and surface hydrophobicity mapping of both proteins in different media showed that RTA rearranges its structure in a membrane-like environment much more efficiently than MLA. Their refolded states also drastically differ in terms of hydrophobic organization. We assume that the higher conformational plasticity of RTA is favorable for the ER-mediated translocation pathway, which leads to a higher rate of toxin penetration into the cytoplasm.

Identifiants

pubmed: 35204796
pii: biom12020295
doi: 10.3390/biom12020295
pmc: PMC8961613
pii:
doi:

Substances chimiques

Ribosome Inactivating Proteins, Type 2 0
Toxins, Biological 0
mistletoe lectin I 0
Ricin 9009-86-3

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Références

Expert Opin Drug Deliv. 2017 Mar;14(3):341-351
pubmed: 27500785
FEBS Lett. 1999 Oct 1;459(1):80-4
pubmed: 10508921
Biochem J. 1973 Nov;136(3):813-5
pubmed: 4360718
Biochimie. 2017 Nov;142:197-206
pubmed: 28919578
Anal Biochem. 2010 Jan 15;396(2):204-11
pubmed: 19766090
FEBS Lett. 1993 Dec 20;336(1):100-2
pubmed: 8262189
Carbohydr Res. 1994 Feb 17;254:269-76
pubmed: 8180989
Biophys J. 1999 May;76(5):2460-71
pubmed: 10233063
FEBS Lett. 1996 Aug 26;392(2):166-8
pubmed: 8772196
Curr Opin Cell Biol. 2018 Aug;53:22-28
pubmed: 29719269
Biochimie. 2020 Jul;174:107-116
pubmed: 32334043
Curr Protoc Bioinformatics. 2016 Jun 20;54:5.6.1-5.6.37
pubmed: 27322406
Cell Mol Life Sci. 2006 Aug;63(16):1850-66
pubmed: 16799768
FEBS Lett. 1999 Jun 11;452(3):211-4
pubmed: 10386592
Toxins (Basel). 2019 Jun 18;11(6):
pubmed: 31216687
Int J Mol Sci. 2019 Mar 15;20(6):
pubmed: 30875878
Biochem Soc Trans. 1992 Nov;20(4):717-9
pubmed: 1487048
Biochem J. 2011 Jun 1;436(2):371-85
pubmed: 21388347
Toxins (Basel). 2021 May 25;13(6):
pubmed: 34070659
FEBS Lett. 1998 Jul 24;431(3):367-70
pubmed: 9714544
Eur J Cell Biol. 2002 Oct;81(10):529-38
pubmed: 12437187
J Biol Chem. 1991 Oct 5;266(28):18586-92
pubmed: 1917980
Proteins. 1991;10(3):240-50
pubmed: 1881880
Biomolecules. 2013 Dec 10;3(4):997-1029
pubmed: 24970201
J Biol Chem. 2009 Apr 10;284(15):10232-42
pubmed: 19211561
Eur J Biochem. 1999 Sep;264(3):775-84
pubmed: 10491123
Curr Top Microbiol Immunol. 2012;357:19-40
pubmed: 21761287
Biotechnol Bioeng. 2011 Dec;108(12):2777-93
pubmed: 21809331
J Biol Chem. 1988 Jun 25;263(18):8735-9
pubmed: 3288622
Toxins (Basel). 2015 Jan 09;7(1):49-65
pubmed: 25584427
J Mol Biol. 1994 Dec 9;244(4):410-22
pubmed: 7990130
Sci Rep. 2019 Jan 23;9(1):413
pubmed: 30674891
J Biol Chem. 2017 Jan 20;292(3):872-883
pubmed: 27903650
J Biomol Struct Dyn. 1993 Dec;11(3):483-507
pubmed: 8129869
Protein Expr Purif. 1995 Oct;6(5):665-70
pubmed: 8535160
PLoS One. 2015 Dec 30;10(12):e0146021
pubmed: 26717316
Nature. 2013 May 2;497(7447):80-5
pubmed: 23636399
FEBS Lett. 1988 Apr 25;231(2):378-80
pubmed: 3360143
Mol Biol Cell. 2010 Aug 1;21(15):2543-54
pubmed: 20519439
Histochem Cell Biol. 2004 Jun;121(6):429-39
pubmed: 15221413
FEBS Lett. 1999 Dec 24;464(1-2):63-6
pubmed: 10611484
Cell. 2013 Feb 14;152(4):909-22
pubmed: 23394947

Auteurs

Pavel Volynsky (P)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya Str. 16/10, 117997 Moscow, Russia.

Diana Maltseva (D)

International Laboratory of Microphysiological Systems, Faculty of Biology and Biotechnology, National Research University Higher School of Economics, Myasnitskaya ul. 20, 101000 Moscow, Russia.

Valentin Tabakmakher (V)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya Str. 16/10, 117997 Moscow, Russia.
School of Biomedicine, FEFU Campus, Far Eastern Federal University, 10 Ajax Bay, Russky Island, 690922 Vladivostok, Russia.

Eduard V Bocharov (EV)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya Str. 16/10, 117997 Moscow, Russia.
Moscow Institute of Physics and Technology, Institutskiy per., 9, 141701 Dolgoprudny, Russia.

Maria Raygorodskaya (M)

Scientific Research Center Bioclinicum, Ugreshskaya Str. 2/85, 115088 Moscow, Russia.

Galina Zakharova (G)

Scientific Research Center Bioclinicum, Ugreshskaya Str. 2/85, 115088 Moscow, Russia.

Elena Britikova (E)

Institute of Bioorganic Chemistry NASB, Kuprevich St. 5, 220141 Minsk, Belarus.

Alexander Tonevitsky (A)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya Str. 16/10, 117997 Moscow, Russia.
International Laboratory of Microphysiological Systems, Faculty of Biology and Biotechnology, National Research University Higher School of Economics, Myasnitskaya ul. 20, 101000 Moscow, Russia.
Scientific Research Center Bioclinicum, Ugreshskaya Str. 2/85, 115088 Moscow, Russia.

Roman Efremov (R)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya Str. 16/10, 117997 Moscow, Russia.
International Laboratory of Microphysiological Systems, Faculty of Biology and Biotechnology, National Research University Higher School of Economics, Myasnitskaya ul. 20, 101000 Moscow, Russia.
Moscow Institute of Physics and Technology, Institutskiy per., 9, 141701 Dolgoprudny, Russia.

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Classifications MeSH