OMARU: a robust and multifaceted pipeline for metagenome-wide association study.


Journal

NAR genomics and bioinformatics
ISSN: 2631-9268
Titre abrégé: NAR Genom Bioinform
Pays: England
ID NLM: 101756213

Informations de publication

Date de publication:
Mar 2022
Historique:
received: 28 12 2021
revised: 04 02 2022
accepted: 18 02 2022
entrez: 10 3 2022
pubmed: 11 3 2022
medline: 11 3 2022
Statut: epublish

Résumé

Microbiome is an essential omics layer to elucidate disease pathophysiology. However, we face a challenge of low reproducibility in microbiome studies, partly due to a lack of standard analytical pipelines. Here, we developed OMARU (

Identifiants

pubmed: 35265838
doi: 10.1093/nargab/lqac019
pii: lqac019
pmc: PMC8900191
doi:

Types de publication

Journal Article

Langues

eng

Pagination

lqac019

Informations de copyright

© The Author(s) 2022. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics.

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Auteurs

Toshihiro Kishikawa (T)

Department of Statistical Genetics, Osaka University Graduate School of Medicine, Suita 565-0871, Japan.

Yoshihiko Tomofuji (Y)

Department of Statistical Genetics, Osaka University Graduate School of Medicine, Suita 565-0871, Japan.

Hidenori Inohara (H)

Department of Otorhinolaryngology-Head and Neck Surgery, Osaka University Graduate School of Medicine, Suita 565-0871, Japan.

Yukinori Okada (Y)

Department of Statistical Genetics, Osaka University Graduate School of Medicine, Suita 565-0871, Japan.

Classifications MeSH