Mutations and Evolution of the SARS-CoV-2 Spike Protein.


Journal

Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722

Informations de publication

Date de publication:
19 03 2022
Historique:
received: 30 01 2022
revised: 12 03 2022
accepted: 16 03 2022
entrez: 26 3 2022
pubmed: 27 3 2022
medline: 1 4 2022
Statut: epublish

Résumé

The SARS-CoV-2 spike protein mediates target recognition, cellular entry, and ultimately the viral infection that leads to various levels of COVID-19 severities. Positive evolutionary selection of mutations within the spike protein has led to the genesis of new SARS-CoV-2 variants with greatly enhanced overall fitness. Given the trend of variants with increased fitness arising from spike protein alterations, it is critical that the scientific community understand the mechanisms by which these mutations alter viral functions. As of March 2022, five SARS-CoV-2 strains were labeled "variants of concern" by the World Health Organization: the Alpha, Beta, Gamma, Delta, and Omicron variants. This review summarizes the potential mechanisms by which the common mutations on the spike protein that occur within these strains enhance the overall fitness of their respective variants. In addressing these mutations within the context of the SARS-CoV-2 spike protein structure, spike/receptor binding interface, spike/antibody binding, and virus neutralization, we summarize the general paradigms that can be used to estimate the effects of future mutations along SARS-CoV-2 evolution.

Identifiants

pubmed: 35337047
pii: v14030640
doi: 10.3390/v14030640
pmc: PMC8949778
pii:
doi:

Substances chimiques

Membrane Glycoproteins 0
Spike Glycoprotein, Coronavirus 0
Viral Envelope Proteins 0
spike protein, SARS-CoV-2 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIBIB NIH HHS
ID : R21 EB031310
Pays : United States
Organisme : NIAAA NIH HHS
ID : U01 AA029348
Pays : United States
Organisme : NIH HHS
ID : U01 AA029348, R21 EB031310
Pays : United States

Commentaires et corrections

Type : ErratumIn

Références

mBio. 2020 Oct 30;11(6):
pubmed: 33127862
EMBO J. 2021 Dec 15;40(24):e108944
pubmed: 34601723
Annu Rev Virol. 2016 Sep 29;3(1):237-261
pubmed: 27578435
J Am Chem Soc. 2021 Aug 25;143(33):13205-13211
pubmed: 34375093
Cell Host Microbe. 2021 Mar 10;29(3):477-488.e4
pubmed: 33535027
Viruses. 2021 Jan 14;13(1):
pubmed: 33466921
Nature. 2021 Aug;596(7871):276-280
pubmed: 34237773
Virus Res. 2021 Sep;302:198472
pubmed: 34118359
Cell Discov. 2021 Nov 9;7(1):109
pubmed: 34750362
J Biosaf Biosecur. 2022 Jun;4(1):33-37
pubmed: 35005525
Elife. 2020 Oct 28;9:
pubmed: 33112236
Nat Commun. 2020 Nov 26;11(1):6013
pubmed: 33243994
Commun Biol. 2021 Apr 12;4(1):475
pubmed: 33846513
Virus Res. 2021 Oct 2;303:198522
pubmed: 34314772
Semin Immunol. 2021 Jun;55:101533
pubmed: 34836774
J Pept Sci. 1995 Sep-Oct;1(5):319-29
pubmed: 9223011
J Biol Chem. 2021 Oct;297(4):101208
pubmed: 34543625
Science. 2021 Aug 6;373(6555):
pubmed: 34168071
J Med Virol. 2022 Apr;94(4):1728-1733
pubmed: 34897752
Acta Pharmacol Sin. 2020 Sep;41(9):1141-1149
pubmed: 32747721
Immunity. 2021 Jun 8;54(6):1276-1289.e6
pubmed: 33836142
Nature. 2022 Feb;602(7898):671-675
pubmed: 35016199
J Cell Immunol. 2021;3(2):103-108
pubmed: 33969357
Cell. 2020 Aug 20;182(4):812-827.e19
pubmed: 32697968
Cell Rep. 2021 Jun 29;35(13):109292
pubmed: 34166617
MedComm (2020). 2021 Dec 16;2(4):838-845
pubmed: 34957469
J Infect. 2021 Oct;83(4):e1-e3
pubmed: 34419559
J Virol. 2020 Mar 17;94(7):
pubmed: 31996437
PLoS Med. 2006 Jul;3(7):e237
pubmed: 16796401
Cell Rep. 2021 Jan 12;34(2):108630
pubmed: 33417835
FEBS J. 2021 Sep;288(17):5010-5020
pubmed: 33264497
Nat Struct Mol Biol. 2020 Aug;27(8):763-767
pubmed: 32647346
Nat Commun. 2021 Sep 9;12(1):5333
pubmed: 34504087
Cell. 2020 Sep 3;182(5):1295-1310.e20
pubmed: 32841599
Biochem Biophys Res Commun. 2004 Jun 18;319(1):283-8
pubmed: 15158473
Front Cell Infect Microbiol. 2021 Oct 13;11:720357
pubmed: 34722330
Nature. 2022 Feb;602(7896):300-306
pubmed: 34823256
J Infect. 2020 May;80(5):554-562
pubmed: 32169481
iScience. 2022 Jan 21;25(1):103589
pubmed: 34909610
Nat Rev Microbiol. 2022 Apr;20(4):187-188
pubmed: 35181769
EMBO J. 2020 Dec 1;39(23):e106267
pubmed: 33051876
Comput Struct Biotechnol J. 2021 Oct 04;19:5556-5567
pubmed: 34630935
Nat Microbiol. 2020 Nov;5(11):1403-1407
pubmed: 32669681
Cell. 2021 Apr 29;184(9):2332-2347.e16
pubmed: 33761326

Auteurs

Nicholas Magazine (N)

Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, LA 70802, USA.

Tianyi Zhang (T)

Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, LA 70802, USA.

Yingying Wu (Y)

Center of Mathematical Sciences and Applications, Harvard University, Cambridge, MA 02138, USA.

Michael C McGee (MC)

Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, LA 70802, USA.

Gianluca Veggiani (G)

The Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada.

Weishan Huang (W)

Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, LA 70802, USA.
Department of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY 14853, USA.

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Classifications MeSH