Mutations of the DNA repair gene PNKP in a patient with microcephaly, seizures, and developmental delay (MCSZ) presenting with a high-grade brain tumor.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
30 03 2022
Historique:
received: 10 10 2021
accepted: 04 03 2022
entrez: 31 3 2022
pubmed: 1 4 2022
medline: 2 4 2022
Statut: epublish

Résumé

Polynucleotide Kinase-Phosphatase (PNKP) is a bifunctional enzyme that possesses both DNA 3'-phosphatase and DNA 5'-kinase activities, which are required for processing termini of single- and double-strand breaks generated by reactive oxygen species (ROS), ionizing radiation and topoisomerase I poisons. Even though PNKP is central to DNA repair, there have been no reports linking PNKP mutations in a Microcephaly, Seizures, and Developmental Delay (MSCZ) patient to cancer. Here, we characterized the biochemical significance of 2 germ-line point mutations in the PNKP gene of a 3-year old male with MSCZ who presented with a high-grade brain tumor (glioblastoma multiforme) within the cerebellum. Functional and biochemical studies demonstrated these PNKP mutations significantly diminished DNA kinase/phosphatase activities, altered its cellular distribution, caused defective repair of DNA single/double stranded breaks, and were associated with a higher propensity for oncogenic transformation. Our findings indicate that specific PNKP mutations may contribute to tumor initiation within susceptible cells in the CNS by limiting DNA damage repair and increasing rates of spontaneous mutations resulting in pediatric glioma associated driver mutations such as ATRX and TP53.

Identifiants

pubmed: 35354845
doi: 10.1038/s41598-022-09097-w
pii: 10.1038/s41598-022-09097-w
pmc: PMC8967877
doi:

Substances chimiques

PNKP protein, human EC 2.7.1.-
Phosphotransferases (Alcohol Group Acceptor) EC 2.7.1.-
DNA Repair Enzymes EC 6.5.1.-

Types de publication

Case Reports Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

5386

Subventions

Organisme : NCI NIH HHS
ID : P50 CA211015
Pays : United States
Organisme : NINDS NIH HHS
ID : R25NS079200
Pays : United States

Informations de copyright

© 2022. The Author(s).

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Auteurs

Bingcheng Jiang (B)

Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Ave., Edmonton, AB, T6G 1Z2, Canada.

Cameron Murray (C)

Department of Biochemistry, University of Alberta, Medical Sciences Building, Edmonton, AB, T6G 2H7, Canada.

Bonnie L Cole (BL)

Department of Pathology, University of Washington, Seattle, WA, USA.

J N Mark Glover (JNM)

Department of Biochemistry, University of Alberta, Medical Sciences Building, Edmonton, AB, T6G 2H7, Canada.

Gordon K Chan (GK)

Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Ave., Edmonton, AB, T6G 1Z2, Canada.

Jean Deschenes (J)

Department of Laboratory Medicine and Pathology, University of Alberta, Cross Cancer Institute, 11560 University Ave., Edmonton, AB, T6G 1Z2, Canada.

Rajam S Mani (RS)

Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Ave., Edmonton, AB, T6G 1Z2, Canada.

Sudip Subedi (S)

Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Ave., Edmonton, AB, T6G 1Z2, Canada.

John D Nerva (JD)

Department of Neurological Surgery, Tulane University, New Orleans, LA, USA.

Anthony C Wang (AC)

Department of Neurological Surgery, University of California Los Angeles, Los Angeles, CA, USA.

Christina M Lockwood (CM)

Department of Laboratory Medicine, University of Washington, Seattle, WA, USA.

Heather C Mefford (HC)

Division of Genetics Medicine, University of Washington, Seattle, WA, USA.

Sarah E S Leary (SES)

Division of Pediatric Hematology/Oncology, Seattle Children's Hospital, Seattle, WA, USA.

Jeffery G Ojemann (JG)

Department of Neurological Surgery, University of Washington, Seattle, WA, USA.

Michael Weinfeld (M)

Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Ave., Edmonton, AB, T6G 1Z2, Canada. mweinfel@ualberta.ca.

Chibawanye I Ene (CI)

Department of Neurological Surgery, MD Anderson Cancer Center, Houston, TX, USA. cene@mdanderson.org.

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