A locus conferring tolerance to Theileria infection in African cattle.


Journal

PLoS genetics
ISSN: 1553-7404
Titre abrégé: PLoS Genet
Pays: United States
ID NLM: 101239074

Informations de publication

Date de publication:
04 2022
Historique:
received: 24 09 2021
accepted: 14 02 2022
entrez: 21 4 2022
pubmed: 22 4 2022
medline: 26 4 2022
Statut: epublish

Résumé

East Coast fever, a tick-borne cattle disease caused by the Theileria parva parasite, is among the biggest natural killers of cattle in East Africa, leading to over 1 million deaths annually. Here we report on the genetic analysis of a cohort of Bos indicus (Boran) cattle demonstrating heritable tolerance to infection with T. parva (h2 = 0.65, s.e. 0.57). Through a linkage analysis we identify a 6 Mb genomic region on bovine chromosome 15 that is significantly associated with survival outcome following T. parva exposure. Testing this locus in an independent cohort of animals replicates this association with survival following T. parva infection. A stop gained variant in a paralogue of the FAF1 gene in this region was found to be highly associated with survival across both related and unrelated animals, with only one of the 20 homozygote carriers (T/T) of this change succumbing to the disease in contrast to 44 out of 97 animals homozygote for the reference allele (C/C). Consequently, we present a genetic locus linked to tolerance of one of Africa's most important cattle diseases, raising the promise of marker-assisted selection for cattle that are less susceptible to infection by T. parva.

Identifiants

pubmed: 35446841
doi: 10.1371/journal.pgen.1010099
pii: PGENETICS-D-21-01288
pmc: PMC9022807
doi:

Substances chimiques

Adaptor Proteins, Signal Transducing 0
Apoptosis Regulatory Proteins 0
FAF1 protein, human 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1010099

Subventions

Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/H009515/1
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BBS/E/D/30002275
Pays : United Kingdom

Déclaration de conflit d'intérêts

We have read the journal’s policy and the authors of this manuscript have the following competing interests: The Centre for Tropical Livestock Genetics and Health (CTLGH) has filed a patent application regarding the use of this locus in improving cattle through methods such as marker assisted breeding.

Références

Anim Genet. 2014 Apr;45(2):297-300
pubmed: 24303974
PLoS Genet. 2012 Jan;8(1):e1002467
pubmed: 22291605
Genome Res. 2002 Apr;12(4):595-601
pubmed: 11932243
Gigascience. 2015 Feb 25;4:7
pubmed: 25722852
Parasit Vectors. 2012 Sep 07;5:194
pubmed: 22958352
J Virol. 2002 Aug;76(15):7918-21
pubmed: 12097608
Nat Genet. 2011 May;43(5):491-8
pubmed: 21478889
Anim Genet. 2008 Aug;39(4):346-53
pubmed: 18462481
Nat Commun. 2020 Sep 21;11(1):4739
pubmed: 32958756
J Virol. 2004 Dec;78(24):13489-500
pubmed: 15564460
Curr Protoc Bioinformatics. 2013;43:11.10.1-11.10.33
pubmed: 25431634
Parasitol Res. 1998 May;84(5):408-16
pubmed: 9610640
Bioinformatics. 2010 Nov 15;26(22):2867-73
pubmed: 20926424
Nat Methods. 2011 Dec 04;9(2):179-81
pubmed: 22138821
Sci Rep. 2015 Apr 15;5:9900
pubmed: 25873518
Bioinformatics. 2015 Jan 15;31(2):166-9
pubmed: 25260700
Front Cell Infect Microbiol. 2021 Nov 05;11:751671
pubmed: 34804994
Prev Vet Med. 2020 Aug;181:105062
pubmed: 32615453
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W71-4
pubmed: 17485472
Genome Biol. 2016 Jun 06;17(1):122
pubmed: 27268795
Genome Res. 2010 Sep;20(9):1297-303
pubmed: 20644199
PLoS Genet. 2009 Jun;5(6):e1000529
pubmed: 19543373
PLoS Genet. 2014 Apr 17;10(4):e1004234
pubmed: 24743097
J Virol. 2005 Aug;79(16):10408-19
pubmed: 16051833
Parasitol Res. 2010 Jan;106(2):357-65
pubmed: 19902251
Onderstepoort J Vet Res. 2005 Mar;72(1):13-22
pubmed: 15991702
Int J Parasitol Parasites Wildl. 2015 May 08;4(2):244-51
pubmed: 26005635
Bioinformatics. 2011 Nov 1;27(21):2987-93
pubmed: 21903627
Infect Immun. 1996 Feb;64(2):557-62
pubmed: 8550207
Bioinformatics. 2011 Aug 1;27(15):2156-8
pubmed: 21653522
Res Synth Methods. 2020 Nov;11(6):913-919
pubmed: 32991790
J Virol. 2012 Feb;86(4):2021-30
pubmed: 22171251
Bioinformatics. 2013 Jan 1;29(1):15-21
pubmed: 23104886
J Immunol. 2003 Aug 1;171(3):1224-31
pubmed: 12874209
Proc Natl Acad Sci U S A. 2019 Jun 18;116(25):12428-12436
pubmed: 31160464
BMC Vet Res. 2013 Aug 30;9:171
pubmed: 24000820

Auteurs

David Wragg (D)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Elizabeth A J Cook (EAJ)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Perle Latré de Laté (P)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Johanneke D Hemmink (JD)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.
Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Regina Njeru (R)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Jessica Powell (J)

The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Edith A Paxton (EA)

The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Rebecca Callaby (R)

The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.
The Epidemiology, Economics and Risk Assessment (EEA) Group, Easter Bush Campus, Edinburgh, United Kingdom.

Andrea Talenti (A)

The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Antoinette A Miyunga (AA)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Gideon Ndambuki (G)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Stephen Mwaura (S)

ILRI Kenya, Nairobi, Kenya.

Harriet Auty (H)

Institute of Biodiversity Animal Health & Comparative Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, United Kingdom.

Oswald Matika (O)

The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Musa Hassan (M)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Karen Marshall (K)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

Timothy Connelley (T)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Liam J Morrison (LJ)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

B Mark deC Bronsvoort (BMD)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

W Ivan Morrison (WI)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Philip G Toye (PG)

Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya.
ILRI Kenya, Nairobi, Kenya.

James G D Prendergast (JGD)

Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom.
The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH