Automatic contouring QA method using a deep learning-based autocontouring system.


Journal

Journal of applied clinical medical physics
ISSN: 1526-9914
Titre abrégé: J Appl Clin Med Phys
Pays: United States
ID NLM: 101089176

Informations de publication

Date de publication:
Aug 2022
Historique:
revised: 27 02 2022
received: 12 01 2022
accepted: 28 04 2022
pubmed: 18 5 2022
medline: 11 8 2022
entrez: 17 5 2022
Statut: ppublish

Résumé

To determine the most accurate similarity metric when using an independent system to verify automatically generated contours. A reference autocontouring system (primary system to create clinical contours) and a verification autocontouring system (secondary system to test the primary contours) were used to generate a pair of 6 female pelvic structures (UteroCervix [uterus + cervix], CTVn [nodal clinical target volume (CTV)], PAN [para-aortic lymph nodes], bladder, rectum, and kidneys) on 49 CT scans from our institution and 38 from other institutions. Additionally, clinically acceptable and unacceptable contours were manually generated using the 49 internal CT scans. Eleven similarity metrics (volumetric Dice similarity coefficient (DSC), Hausdorff distance, 95% Hausdorff distance, mean surface distance, and surface DSC with tolerances from 1 to 10 mm) were calculated between the reference and the verification autocontours, and between the manually generated and the verification autocontours. A support vector machine (SVM) was used to determine the threshold that separates clinically acceptable and unacceptable contours for each structure. The 11 metrics were investigated individually and in certain combinations. Linear, radial basis function, sigmoid, and polynomial kernels were tested using the combinations of metrics as inputs for the SVM. The highest contouring error detection accuracies were 0.91 for the UteroCervix, 0.90 for the CTVn, 0.89 for the PAN, 0.92 for the bladder, 0.95 for the rectum, and 0.97 for the kidneys and were achieved using surface DSCs with a thickness of 1, 2, or 3 mm. The linear kernel was the most accurate and consistent when a combination of metrics was used as an input for the SVM. However, the best model accuracy from the combinations of metrics was not better than the best model accuracy from a surface DSC as an input. We distinguished clinically acceptable contours from clinically unacceptable contours with an accuracy higher than 0.9 for the targets and critical structures in patients with cervical cancer; the most accurate similarity metric was surface DSC with a thickness of 1, 2, or 3 mm.

Identifiants

pubmed: 35580067
doi: 10.1002/acm2.13647
pmc: PMC9359039
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e13647

Informations de copyright

© 2022 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine.

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Auteurs

Dong Joo Rhee (DJ)

The University of Texas Graduate School of Biomedical Sciences at Houston, Houston, Texas, USA.
Department of Radiation Physics, Division of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Chidinma P Anakwenze Akinfenwa (CPA)

Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Bastien Rigaud (B)

Department of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Anuja Jhingran (A)

Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Carlos E Cardenas (CE)

Department of Radiation Physics, Division of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Lifei Zhang (L)

Department of Radiation Physics, Division of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Surendra Prajapati (S)

Department of Radiation Physics, Division of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Stephen F Kry (SF)

Department of Radiation Physics, Division of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Kristy K Brock (KK)

Department of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Beth M Beadle (BM)

Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California, USA.

William Shaw (W)

Department of Medical Physics (G68), University of the Free State, Bloemfontein, South Africa.

Frederika O'Reilly (F)

Department of Medical Physics (G68), University of the Free State, Bloemfontein, South Africa.

Jeannette Parkes (J)

Division of Radiation Oncology and Medical Physics, University of Cape Town and Groote Schuur Hospital, Cape Town, South Africa.

Hester Burger (H)

Division of Radiation Oncology and Medical Physics, University of Cape Town and Groote Schuur Hospital, Cape Town, South Africa.

Nazia Fakie (N)

Division of Radiation Oncology and Medical Physics, University of Cape Town and Groote Schuur Hospital, Cape Town, South Africa.

Chris Trauernicht (C)

Division of Medical Physics, Stellenbosch University, Tygerberg Academic Hospital, Cape Town, South Africa.

Hannah Simonds (H)

Division of Radiation Oncology, Stellenbosch University, Tygerberg Academic Hospital, Cape Town, South Africa.

Laurence E Court (LE)

Department of Radiation Physics, Division of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

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Classifications MeSH