Mendelian randomization analysis of plasma levels of CD209 and MICB proteins and the risk of varicose veins of lower extremities.
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2022
2022
Historique:
received:
04
02
2022
accepted:
05
05
2022
entrez:
20
5
2022
pubmed:
21
5
2022
medline:
25
5
2022
Statut:
epublish
Résumé
Varicose veins of lower extremities (VVs) are a highly prevalent condition, the pathogenesis of which is still not fully elucidated. Mendelian randomization (MR) can provide useful preliminary information on the traits that are potentially causally related to the disease. The aim of the present study is to replicate the effects of the plasma levels of MHC class I polypeptide-related sequence B (MICB) and cluster of differentiation 209 (CD209) proteins reported in a previous hypothesis-free MR study. We conducted MR analysis using a fixed effects inverse-variance weighted meta-analysis of Wald ratios method. For MICB and CD209, we used data from a large-scale genome-wide association study (GWAS) for plasma protein levels (N = 3,301). For VVs, we used GWAS data obtained in the FinnGen project (N = 128,698), the eMERGE network (phase 3, N = 48,429), and the UK Biobank data available in the Gene ATLAS (N = 452,264). The data used in the study were obtained in individuals of European descent. The results for MICB did not pass criteria for statistical significance and replication. The results for CD209 passed all statistical significance thresholds, indicating that the genetically predicted increase in CD209 level is associated with increased risk of VVs (βMR (SE) = 0.07 (0.01), OR (95% CI) = 1.08 (1.05-1.10), P-value = 5.9 ×10-11 in the meta-analysis of three cohorts). Our findings provide further support that CD209 can potentially be involved in VVs. In future studies, independent validation of our results using data from more powerful GWASs for CD209 measured by different methods would be beneficial.
Identifiants
pubmed: 35594287
doi: 10.1371/journal.pone.0268725
pii: PONE-D-22-02162
pmc: PMC9122226
doi:
Types de publication
Journal Article
Meta-Analysis
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0268725Subventions
Organisme : NHGRI NIH HHS
ID : U01 HG008676
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG011172
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008657
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008684
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008679
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008666
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008680
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008673
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008685
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG006379
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008664
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008701
Pays : United States
Organisme : NHGRI NIH HHS
ID : U01 HG008672
Pays : United States
Organisme : NIAMS NIH HHS
ID : P30 AR072572
Pays : United States
Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
Références
Nat Genet. 2018 Nov;50(11):1593-1599
pubmed: 30349118
Ann Epidemiol. 2005 Mar;15(3):175-84
pubmed: 15723761
Elife. 2018 May 30;7:
pubmed: 29846171
Cell. 2016 Nov 17;167(5):1415-1429.e19
pubmed: 27863252
Nat Genet. 2018 May;50(5):693-698
pubmed: 29686387
Pathology. 2010;42(5):446-53
pubmed: 20632821
Hum Mol Genet. 2010 May 1;19(9):1863-72
pubmed: 20167578
Br J Surg. 2009 Nov;96(11):1231-42
pubmed: 19847861
PLoS One. 2014 Dec 12;9(12):e114748
pubmed: 25504222
Am J Hum Genet. 2007 Sep;81(3):559-75
pubmed: 17701901
Med Oncol. 2014 Oct;31(10):202
pubmed: 25182705
Eur J Vasc Endovasc Surg. 2017 Dec;54(6):752-758
pubmed: 29031868
BMC Med. 2020 Nov 17;18(1):334
pubmed: 33198801
Nat Genet. 2016 Oct;48(10):1279-83
pubmed: 27548312
BMJ. 2018 Jul 12;362:k601
pubmed: 30002074
Mol Immunol. 2008 Apr;45(8):2359-69
pubmed: 18155766
Nature. 2018 Jun;558(7708):73-79
pubmed: 29875488
Ann Vasc Surg. 2015 Feb;29(2):377-84
pubmed: 25449990
Nat Commun. 2020 Jun 26;11(1):3255
pubmed: 32591531
PLoS Genet. 2019 Apr 18;15(4):e1008110
pubmed: 30998689
Nat Genet. 2020 Oct;52(10):1122-1131
pubmed: 32895551
Clin Genet. 2018 Aug;94(2):191-199
pubmed: 29660117
PLoS Genet. 2008 Jul 04;4(7):e1000118
pubmed: 18604267
Nat Genet. 2016 Oct;48(10):1284-1287
pubmed: 27571263
Gigascience. 2015 Feb 25;4:7
pubmed: 25722852
Adv Ther. 2020 Feb;37(Suppl 1):1-5
pubmed: 31970659
Nat Genet. 2014 Feb;46(2):100-6
pubmed: 24473328
Nat Rev Genet. 2018 Sep;19(9):566-580
pubmed: 29872216
J Leukoc Biol. 2011 Mar;89(3):329-42
pubmed: 20940323
Arterioscler Thromb Vasc Biol. 2009 Nov;29(11):1958-67
pubmed: 19729612
Nat Genet. 2018 Sep;50(9):1335-1341
pubmed: 30104761
Nat Commun. 2017 Feb 27;8:14357
pubmed: 28240269
J Vasc Surg Venous Lymphat Disord. 2017 May;5(3):460-467
pubmed: 28411716
J Epidemiol Community Health. 1999 Mar;53(3):149-53
pubmed: 10396491
Int J Epidemiol. 2016 Oct;45(5):1600-1616
pubmed: 27342221
Genet Epidemiol. 2019 Feb;43(1):63-81
pubmed: 30298529
Nat Genet. 2020 Jul;52(7):740-747
pubmed: 32451458
Nature. 2018 Oct;562(7726):203-209
pubmed: 30305743
Am J Epidemiol. 2017 Nov 1;186(9):1026-1034
pubmed: 28641372
Nat Genet. 2016 Nov;48(11):1443-1448
pubmed: 27694958
Trials. 2014 Sep 17;15:363
pubmed: 25230735
PLoS Med. 2015 Mar 31;12(3):e1001779
pubmed: 25826379
J Thromb Haemost. 2019 Jan;17(1):31-38
pubmed: 30394690
Nature. 1990 May 17;345(6272):229-33
pubmed: 2333095
Eur J Immunogenet. 2004 Jun;31(3):105-14
pubmed: 15182323
J Vasc Interv Radiol. 2012 Jan;23(1):33-9; quiz 40
pubmed: 22030459
JAMA Cardiol. 2021 Jan 1;6(1):7-8
pubmed: 32965465