More HIV-1 RNA detected and quantified with the Cobas 6800 system in patients on antiretroviral therapy.


Journal

The Journal of antimicrobial chemotherapy
ISSN: 1460-2091
Titre abrégé: J Antimicrob Chemother
Pays: England
ID NLM: 7513617

Informations de publication

Date de publication:
28 07 2022
Historique:
received: 12 01 2022
accepted: 11 05 2022
pubmed: 1 6 2022
medline: 2 8 2022
entrez: 31 5 2022
Statut: ppublish

Résumé

Target-detected (TD) results or low-level viraemia (LLV) can be observed in HIV-1 patients on ART, which regularly raises questions. We describe here the impact on HIV-1 RNA quantification of switching from the COBAS AmpliPrep/COBAS TaqMan (CAP/CTM) to the Cobas 6800 system (C6800), based on analyses of viraemia close to the lower limit of quantification (LLoQ). We retrospectively selected two groups of patients: 200 individuals whose viral loads (VLs) were consistently <50 copies/mL with CAP/CTM for at least 3 years before switching to C6800 (group 1), and 35 other patients with confirmed LLV when C6800 was in use (group 2). In both groups, we compared several consecutive VL results performed before and after the change of quantification assay. Analyses were performed with McNemar's paired tests or Fisher's exact tests. In group 1, the frequency of TD results (below or above the LLoQ) increased significantly after the switch to C6800 for patients with <25% of results being TD for VLs performed with CAP/CTM (P < 0.0001). Significantly more patients had at least one VL ≥20 or ≥50 copies/mL with C6800, in both group 1 (37.0% versus 18.5%; P < 0.0001 and 6.5% versus 0%; P = 0.0009, respectively) and group 2 (100% versus 66%; P = 0.0015 and 97% versus 40%; P < 0.0001, respectively). C6800 revealed residual or low-level HIV-1 RNA that was not detected with CAP/CTM, resulting in twice as many patients being found to have a VL ≥20 copies/mL. Physicians and patients should be aware of possible differences in results between assays, and it is crucial to specify the quantitative assay used in studies.

Sections du résumé

BACKGROUND
Target-detected (TD) results or low-level viraemia (LLV) can be observed in HIV-1 patients on ART, which regularly raises questions.
OBJECTIVES
We describe here the impact on HIV-1 RNA quantification of switching from the COBAS AmpliPrep/COBAS TaqMan (CAP/CTM) to the Cobas 6800 system (C6800), based on analyses of viraemia close to the lower limit of quantification (LLoQ).
PATIENTS AND METHODS
We retrospectively selected two groups of patients: 200 individuals whose viral loads (VLs) were consistently <50 copies/mL with CAP/CTM for at least 3 years before switching to C6800 (group 1), and 35 other patients with confirmed LLV when C6800 was in use (group 2). In both groups, we compared several consecutive VL results performed before and after the change of quantification assay. Analyses were performed with McNemar's paired tests or Fisher's exact tests.
RESULTS
In group 1, the frequency of TD results (below or above the LLoQ) increased significantly after the switch to C6800 for patients with <25% of results being TD for VLs performed with CAP/CTM (P < 0.0001). Significantly more patients had at least one VL ≥20 or ≥50 copies/mL with C6800, in both group 1 (37.0% versus 18.5%; P < 0.0001 and 6.5% versus 0%; P = 0.0009, respectively) and group 2 (100% versus 66%; P = 0.0015 and 97% versus 40%; P < 0.0001, respectively).
CONCLUSIONS
C6800 revealed residual or low-level HIV-1 RNA that was not detected with CAP/CTM, resulting in twice as many patients being found to have a VL ≥20 copies/mL. Physicians and patients should be aware of possible differences in results between assays, and it is crucial to specify the quantitative assay used in studies.

Identifiants

pubmed: 35640662
pii: 6595592
doi: 10.1093/jac/dkac174
doi:

Substances chimiques

RNA, Viral 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2251-2256

Subventions

Organisme : Agence Nationale de la Recherche
Organisme : Agence Nationale de la Recherche sur le SIDA et les Maladies Infectieuses Emergentes
Organisme : MIE

Informations de copyright

© The Author(s) 2022. Published by Oxford University Press on behalf of British Society for Antimicrobial Chemotherapy. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Auteurs

Marc Wirden (M)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.

Romain Palich (R)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Basma Abdi (B)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.

Marc Antoine Valantin (MA)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Roland Tubiana (R)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Luminita Schneider (L)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Sophie Seang (S)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Antoine Faycal (A)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Baptiste Sellem (B)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Christine Katlama (C)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Infectious Diseases, Paris, France.

Vincent Calvez (V)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.

Anne Geneviève Marcelin (AG)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, (IPLESP), F75013, Paris, France.
AP-HP, Pitié Salpêtrière Hospital, Department of Virology, Paris, France.

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