X-ray constrained wavefunctions based on Hirshfeld atoms. II. Reproducibility of electron densities in crystals of α-oxalic acid dihydrate.

Hirshfeld atom X-ray constrained wavefunction X-ray wavefunction refinement halting problem α-oxalic acid dihydrate

Journal

Acta crystallographica Section B, Structural science, crystal engineering and materials
ISSN: 2052-5206
Titre abrégé: Acta Crystallogr B Struct Sci Cryst Eng Mater
Pays: England
ID NLM: 101609037

Informations de publication

Date de publication:
01 Jun 2022
Historique:
received: 20 01 2022
accepted: 18 04 2022
entrez: 13 6 2022
pubmed: 14 6 2022
medline: 15 6 2022
Statut: ppublish

Résumé

The Hirshfeld atom-based X-ray constrained wavefunction fitting (HA-XCW) procedure is tested for its reproducibility, and the information content of the fitted wavefunction is critically assessed. Fourteen different α-oxalic acid dihydrate data sets are used for this purpose, and the first joint fitting to 12 of these data sets is reported. There are systematic features in the electron density obtained from all data sets which agree with higher level benchmark calculations, but there are also many other strong systematic features which disagree with the reference calculations, most notably those associated with the electron density near the nuclei. To enhance reproducibility, three new protocols are described and tested to address the halting problem of XCW fitting, namely: an empirical power-function method, which is useful for estimating the accuracy of the structure factor uncertainties; an asymptotic extrapolation method based on ideas from density functional theory; and a `conservative method' whereby the smallest value of the regularization parameter is chosen from a series of data sets, or subsets.

Identifiants

pubmed: 35695114
pii: S2052520622004103
doi: 10.1107/S2052520622004103
doi:

Substances chimiques

Oxalic Acid 9E7R5L6H31

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

397-415

Auteurs

Max L Davidson (ML)

School of Molecular Sciences, The University of Western Australia, 35 Stirling Highway, Crawley 6009, Western Australia, Australia.

Simon Grabowsky (S)

Departement für Chemie, Biochemie und Pharmazie, Universität Bern, Freiestrasse 3, 3012 Bern, Switzerland.

Dylan Jayatilaka (D)

School of Molecular Sciences, The University of Western Australia, 35 Stirling Highway, Crawley 6009, Western Australia, Australia.

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Classifications MeSH