ALYREF, a novel factor involved in breast carcinogenesis, acts through transcriptional and post-transcriptional mechanisms selectively regulating the short NEAT1 isoform.


Journal

Cellular and molecular life sciences : CMLS
ISSN: 1420-9071
Titre abrégé: Cell Mol Life Sci
Pays: Switzerland
ID NLM: 9705402

Informations de publication

Date de publication:
01 Jul 2022
Historique:
received: 01 12 2021
accepted: 25 05 2022
revised: 15 05 2022
entrez: 1 7 2022
pubmed: 2 7 2022
medline: 7 7 2022
Statut: epublish

Résumé

The RNA-binding protein ALYREF (THOC4) is involved in transcriptional regulation and nuclear mRNA export, though its role and molecular mode of action in breast carcinogenesis are completely unknown. Here, we identified high ALYREF expression as a factor for poor survival in breast cancer patients. ALYREF significantly influenced cellular growth, apoptosis and mitochondrial energy metabolism in breast cancer cells as well as breast tumorigenesis in orthotopic mouse models. Transcriptional profiling, phenocopy and rescue experiments identified the short isoform of the lncRNA NEAT1 as a molecular trigger for ALYREF effects in breast cancer. Mechanistically, we found that ALYREF binds to the NEAT1 promoter region to enhance the global NEAT1 transcriptional activity. Importantly, by stabilizing CPSF6, a protein that selectively activates the post-transcriptional generation of the short isoform of NEAT1, as well as by direct binding and stabilization of the short isoform of NEAT1, ALYREF selectively fine-tunes the expression of the short NEAT1 isoform. Overall, our study describes ALYREF as a novel factor contributing to breast carcinogenesis and identifies novel molecular mechanisms of regulation the two isoforms of NEAT1.

Identifiants

pubmed: 35776213
doi: 10.1007/s00018-022-04402-2
pii: 10.1007/s00018-022-04402-2
pmc: PMC9249705
doi:

Substances chimiques

ALYREF protein, human 0
NEAT1 long non-coding RNA, human 0
Nuclear Proteins 0
Protein Isoforms 0
RNA, Long Noncoding 0
RNA-Binding Proteins 0
Transcription Factors 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

391

Subventions

Organisme : Austrian Science Fund FWF
ID : W 1226
Pays : Austria

Informations de copyright

© 2022. The Author(s).

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Auteurs

Christiane Klec (C)

Division of Oncology, Department of Internal Medicine, Medical University of Graz, Augenbruggerplatz 15, 8010, Graz, Austria.
Research Unit for Non-Coding RNAs and Genome Editing, Medical University of Graz (MUG), Graz, Austria.

Erik Knutsen (E)

Department of Experimental Therapeutics, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.
Department of Medical Biology, Faculty of Health Sciences, UiT-the Arctic University of Norway, Tromsö, Norway.

Daniela Schwarzenbacher (D)

Division of Oncology, Department of Internal Medicine, Medical University of Graz, Augenbruggerplatz 15, 8010, Graz, Austria.
Research Unit for Non-Coding RNAs and Genome Editing, Medical University of Graz (MUG), Graz, Austria.

Katharina Jonas (K)

Division of Oncology, Department of Internal Medicine, Medical University of Graz, Augenbruggerplatz 15, 8010, Graz, Austria.
Research Unit for Non-Coding RNAs and Genome Editing, Medical University of Graz (MUG), Graz, Austria.

Barbara Pasculli (B)

Fondazione IRCCS Casa Sollievo della Sofferenza Laboratorio di Oncologia, San Giovanni Rotondo, FG, Italy.

Ellen Heitzer (E)

Institute of Human Genetics, Medical University of Graz (MUG), Graz, Austria.

Beate Rinner (B)

Biomedical Research, Medical University of Graz (MUG), Graz, Austria.

Katarina Krajina (K)

Division of Oncology, Department of Internal Medicine, Medical University of Graz, Augenbruggerplatz 15, 8010, Graz, Austria.
Research Unit for Non-Coding RNAs and Genome Editing, Medical University of Graz (MUG), Graz, Austria.

Felix Prinz (F)

Division of Oncology, Department of Internal Medicine, Medical University of Graz, Augenbruggerplatz 15, 8010, Graz, Austria.
Research Unit for Non-Coding RNAs and Genome Editing, Medical University of Graz (MUG), Graz, Austria.

Benjamin Gottschalk (B)

Molecular Biology and Biochemistry, Gottfried Schatz Research Center for Cellular Signaling, Metabolism and Aging, Medical University of Graz (MUG), Graz, Austria.

Peter Ulz (P)

Institute of Human Genetics, Medical University of Graz (MUG), Graz, Austria.

Alexander Deutsch (A)

Division of Hematology, Department of Internal Medicine, Medical University of Graz (MUG), Graz, Austria.

Andreas Prokesch (A)

Division of Cell Biology, Histology and Embryology, Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging, Medical University of Graz, Graz, Austria.

Stephan W Jahn (SW)

Institute of Pathology, Diagnostic and Research Center for Molecular BioMedicine, Medical University of Graz, Graz, Austria.

S Mohammad Lellahi (SM)

Department of Medical Biology, Faculty of Health Sciences, UiT-the Arctic University of Norway, Tromsö, Norway.

Maria Perander (M)

Department of Medical Biology, Faculty of Health Sciences, UiT-the Arctic University of Norway, Tromsö, Norway.

Raffaela Barbano (R)

Fondazione IRCCS Casa Sollievo della Sofferenza Laboratorio di Oncologia, San Giovanni Rotondo, FG, Italy.

Wolfgang F Graier (WF)

Molecular Biology and Biochemistry, Gottfried Schatz Research Center for Cellular Signaling, Metabolism and Aging, Medical University of Graz (MUG), Graz, Austria.

Paola Parrella (P)

Fondazione IRCCS Casa Sollievo della Sofferenza Laboratorio di Oncologia, San Giovanni Rotondo, FG, Italy.

George Adrian Calin (GA)

Department of Translational Pathology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Martin Pichler (M)

Division of Oncology, Department of Internal Medicine, Medical University of Graz, Augenbruggerplatz 15, 8010, Graz, Austria. martin.pichler@medunigraz.at.
Research Unit for Non-Coding RNAs and Genome Editing, Medical University of Graz (MUG), Graz, Austria. martin.pichler@medunigraz.at.

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