Development and Validation of a Personalized Model With Transfer Learning for Acute Kidney Injury Risk Estimation Using Electronic Health Records.
Journal
JAMA network open
ISSN: 2574-3805
Titre abrégé: JAMA Netw Open
Pays: United States
ID NLM: 101729235
Informations de publication
Date de publication:
01 07 2022
01 07 2022
Historique:
entrez:
7
7
2022
pubmed:
8
7
2022
medline:
9
7
2022
Statut:
epublish
Résumé
Acute kidney injury (AKI) is a heterogeneous syndrome prevalent among hospitalized patients. Personalized risk estimation and risk factor identification may allow effective intervention and improved outcomes. To develop and validate personalized AKI risk estimation models using electronic health records (EHRs), examine whether personalized models were beneficial in comparison with global and subgroup models, and assess the heterogeneity of risk factors and their outcomes in different subpopulations. This diagnostic study analyzed EHR data from 1 tertiary care hospital and used machine learning and logistic regression to develop and validate global, subgroup, and personalized risk estimation models. Transfer learning was implemented to enhance the personalized model. Predictor outcomes across subpopulations were analyzed, and metaregression was used to explore predictor interactions. Adults who were hospitalized for 2 or more days from November 1, 2007, to December 31, 2016, were included in the analysis. Patients with moderate or severe kidney dysfunction at admission were excluded. Data were analyzed between August 28, 2019, and May 8, 2022. Clinical and laboratory variables in the EHR. The main outcome was AKI of any severity, and AKI was defined using the Kidney Disease: Improving Global Outcomes serum creatinine criteria. Performance of the models was measured with area under the receiver operating characteristic curve (AUROC), area under the precision-recall curve, and calibration. The study cohort comprised 76 957 inpatient encounters. Patients had a mean (SD) age of 55.5 (17.4) years and included 42 159 men (54.8%). The personalized model with transfer learning outperformed the global model for AKI estimation in terms of AUROC among general inpatients (0.78 [95% CI, 0.77-0.79] vs 0.76 [95% CI, 0.75-0.76]; P < .001) and across the high-risk subgroups (0.79 [95% CI, 0.78-0.80] vs 0.75 [95% CI, 0.74-0.77]; P < .001) and low-risk subgroups (0.74 [95% CI, 0.73-0.75] vs 0.71 [95% CI, 0.70-0.72]; P < .001). The AUROC improvement reached 0.13 for the high-risk subgroups, such as those undergoing liver transplant and cardiac surgery. Moreover, the personalized model with transfer learning performed better than or comparably with the best published models in well-studied AKI subgroups. Predictor outcomes varied significantly between patients, and interaction analysis uncovered modifiers of the predictor outcomes. Results of this study demonstrated that a personalized modeling with transfer learning is an improved AKI risk estimation approach that can be used across diverse patient subgroups. Risk factor heterogeneity and interactions at the individual level highlighted the need for agile, personalized care.
Identifiants
pubmed: 35796212
pii: 2793807
doi: 10.1001/jamanetworkopen.2022.19776
pmc: PMC9250052
doi:
Substances chimiques
Creatinine
AYI8EX34EU
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e2219776Subventions
Organisme : NIGMS NIH HHS
ID : P20 GM130423
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR002366
Pays : United States
Organisme : NIDDK NIH HHS
ID : R01 DK116986
Pays : United States
Commentaires et corrections
Type : ErratumIn
Références
PLoS One. 2017 Jul 31;12(7):e0181658
pubmed: 28759604
Ann Thorac Surg. 2012 Jan;93(1):337-47
pubmed: 22186469
J Am Heart Assoc. 2016 Aug 04;5(8):
pubmed: 27491837
Clin J Am Soc Nephrol. 2014 Jan;9(1):12-20
pubmed: 24178971
J Pediatr Pharmacol Ther. 2016 Sep-Oct;21(5):426-431
pubmed: 27877096
Front Med (Lausanne). 2020 Nov 13;7:592007
pubmed: 33282893
Stud Health Technol Inform. 2019 Aug 21;264:368-372
pubmed: 31437947
J Biomed Inform. 2010 Oct;43(5):669-85
pubmed: 20450985
AMIA Annu Symp Proc. 2011;2011:1454-63
pubmed: 22195209
Crit Care Med. 2018 Jul;46(7):1070-1077
pubmed: 29596073
PLoS One. 2015 Aug 24;10(8):e0136230
pubmed: 26302370
J Gen Intern Med. 2013 Sep;28 Suppl 3:S660-5
pubmed: 23797912
Proceedings (IEEE Int Conf Bioinformatics Biomed). 2018 Dec;2018:683-686
pubmed: 33376624
Int J Med Inform. 2022 Jul;163:104785
pubmed: 35504130
Biotechnol J. 2012 Aug;7(8):973-9
pubmed: 22180345
Front Cardiovasc Med. 2021 Oct 05;8:733528
pubmed: 34676253
J Card Surg. 2021 Mar;36(3):806-814
pubmed: 33314365
J Cardiothorac Vasc Anesth. 2021 Mar;35(3):866-873
pubmed: 32713734
J Clin Oncol. 2018 Mar 1;36(7):682-688
pubmed: 29320311
Nephrology (Carlton). 2021 Jan;26(1):23-29
pubmed: 32808734
BMC Nephrol. 2019 May 30;20(1):195
pubmed: 31146701
Crit Care Med. 2018 Jan;46(1):12-20
pubmed: 29088001
Am J Cardiol. 2015 Jun 15;115(12):1636-42
pubmed: 25891989
Circ Cardiovasc Qual Outcomes. 2019 Nov;12(11):e005854
pubmed: 31722540
Mayo Clin Proc. 2017 Oct;92(10):1479-1485
pubmed: 28943016
Knee Surg Sports Traumatol Arthrosc. 2022 Feb;30(2):545-554
pubmed: 32880677
BJS Open. 2019 Aug 02;3(4):549
pubmed: 31388648
J Biomed Inform. 2020 Feb;102:103361
pubmed: 31911172
AMIA Jt Summits Transl Sci Proc. 2015 Mar 25;2015:132-6
pubmed: 26306255
Clin Cardiol. 2016 Sep;39(9):516-23
pubmed: 27279131
Nephrol Dial Transplant. 2016 Feb;31(2):231-40
pubmed: 26705194
Comput Biol Med. 2020 Jan;116:103580
pubmed: 32001013
Crit Care. 2004 Dec;8(6):R459-66
pubmed: 15566592
Intensive Care Med. 2015 Aug;41(8):1411-23
pubmed: 26162677
Ann Palliat Med. 2021 Feb;10(2):1772-1778
pubmed: 33353355
Med Decis Making. 2010 Nov-Dec;30(6):639-50
pubmed: 20354229
Aging Clin Exp Res. 2020 Jun;32(6):1121-1128
pubmed: 31183748
JAMA Netw Open. 2020 Aug 3;3(8):e2012892
pubmed: 32780123
BMC Nephrol. 2020 May 5;21(1):162
pubmed: 32370757
Cardiorenal Med. 2015 Oct;5(4):297-305
pubmed: 26648946
Nat Commun. 2020 Nov 9;11(1):5668
pubmed: 33168827
Nephron Clin Pract. 2012;120(4):c179-84
pubmed: 22890468
PLoS One. 2015 May 15;10(5):e0127428
pubmed: 25978419
Kidney Int. 2007 Sep;72(5):624-31
pubmed: 17622275
J Clin Med. 2018 Nov 08;7(11):
pubmed: 30413107
Lancet Digit Health. 2021 Nov;3(11):e745-e750
pubmed: 34711379
Clin Transl Sci. 2020 May;13(3):491-497
pubmed: 31785129
J Am Med Inform Assoc. 2010 Mar-Apr;17(2):124-30
pubmed: 20190053
Sci Rep. 2018 Nov 23;8(1):17298
pubmed: 30470779
PLoS Med. 2018 Nov 27;15(11):e1002703
pubmed: 30481186
Lancet Digit Health. 2021 Aug;3(8):e471-e485
pubmed: 34215564
BMJ Open. 2017 Sep 27;7(9):e016591
pubmed: 28963291
Crit Care. 2014 Nov 20;18(6):606
pubmed: 25673427
Nat Rev Nephrol. 2018 Apr;14(4):217-230
pubmed: 29355173
Ann Intern Med. 2009 May 5;150(9):604-12
pubmed: 19414839
Adv Nutr. 2011 Nov;2(6):457-62
pubmed: 22332088
JAMIA Open. 2019 Apr;2(1):115-122
pubmed: 30976758
AMIA Annu Symp Proc. 2018 Apr 16;2017:565-574
pubmed: 29854121
BMJ Open. 2020 Mar 23;10(3):e034325
pubmed: 32205373
BMC Cardiovasc Disord. 2020 Dec 10;20(1):517
pubmed: 33302875
JAMA Netw Open. 2019 Nov 1;2(11):e1916021
pubmed: 31755952
Eur J Anaesthesiol. 2013 Nov;30(11):704-12
pubmed: 24067536
BMC Med Inform Decis Mak. 2019 Jan 31;19(Suppl 1):16
pubmed: 30700291
Open Med (Wars). 2020 Nov 09;15(1):1128-1136
pubmed: 33336068
J Burns Wounds. 2006 Aug 08;5:e5
pubmed: 16921418
BMC Med Inform Decis Mak. 2018 Mar 22;18(Suppl 1):13
pubmed: 29589567
PLoS One. 2014 Jun 13;9(6):e99895
pubmed: 24926660
Ther Clin Risk Manag. 2020 Jun 22;16:539-550
pubmed: 32606713
Biometrics. 1988 Sep;44(3):837-45
pubmed: 3203132
BMJ. 2015 Nov 11;351:h5639
pubmed: 26561522
Ren Fail. 2020 Nov;42(1):869-876
pubmed: 32838613
Nature. 2019 Aug;572(7767):116-119
pubmed: 31367026
J Am Heart Assoc. 2014 Dec;3(6):e001380
pubmed: 25516439
J Am Soc Nephrol. 2011 Jan;22(1):28-38
pubmed: 21209252
Ren Fail. 2020 Nov;42(1):428-436
pubmed: 32401139
BMC Med Inform Decis Mak. 2016 Mar 29;16:39
pubmed: 27025458
J Am Med Inform Assoc. 2013 Dec;20(e2):e243-52
pubmed: 23837993