A deep image-to-image network organ segmentation algorithm for radiation treatment planning: principles and evaluation.


Journal

Radiation oncology (London, England)
ISSN: 1748-717X
Titre abrégé: Radiat Oncol
Pays: England
ID NLM: 101265111

Informations de publication

Date de publication:
22 Jul 2022
Historique:
received: 14 03 2022
accepted: 28 06 2022
entrez: 22 7 2022
pubmed: 23 7 2022
medline: 27 7 2022
Statut: epublish

Résumé

We describe and evaluate a deep network algorithm which automatically contours organs at risk in the thorax and pelvis on computed tomography (CT) images for radiation treatment planning. The algorithm identifies the region of interest (ROI) automatically by detecting anatomical landmarks around the specific organs using a deep reinforcement learning technique. The segmentation is restricted to this ROI and performed by a deep image-to-image network (DI2IN) based on a convolutional encoder-decoder architecture combined with multi-level feature concatenation. The algorithm is commercially available in the medical products "syngo.via RT Image Suite VB50" and "AI-Rad Companion Organs RT VA20" (Siemens Healthineers). For evaluation, thoracic CT images of 237 patients and pelvic CT images of 102 patients were manually contoured following the Radiation Therapy Oncology Group (RTOG) guidelines and compared to the DI2IN results using metrics for volume, overlap and distance, e.g., Dice Similarity Coefficient (DSC) and Hausdorff Distance (HD We observed high correlations between automatic and manual contours. The best results were obtained for the lungs (DSC 0.97, HD The DI2IN algorithm automatically generated contours for organs at risk close to those by a human expert, making the contouring step in radiation treatment planning simpler and faster. Few cases still required manual corrections, mainly for heart and rectum.

Sections du résumé

BACKGROUND BACKGROUND
We describe and evaluate a deep network algorithm which automatically contours organs at risk in the thorax and pelvis on computed tomography (CT) images for radiation treatment planning.
METHODS METHODS
The algorithm identifies the region of interest (ROI) automatically by detecting anatomical landmarks around the specific organs using a deep reinforcement learning technique. The segmentation is restricted to this ROI and performed by a deep image-to-image network (DI2IN) based on a convolutional encoder-decoder architecture combined with multi-level feature concatenation. The algorithm is commercially available in the medical products "syngo.via RT Image Suite VB50" and "AI-Rad Companion Organs RT VA20" (Siemens Healthineers). For evaluation, thoracic CT images of 237 patients and pelvic CT images of 102 patients were manually contoured following the Radiation Therapy Oncology Group (RTOG) guidelines and compared to the DI2IN results using metrics for volume, overlap and distance, e.g., Dice Similarity Coefficient (DSC) and Hausdorff Distance (HD
RESULTS RESULTS
We observed high correlations between automatic and manual contours. The best results were obtained for the lungs (DSC 0.97, HD
CONCLUSIONS CONCLUSIONS
The DI2IN algorithm automatically generated contours for organs at risk close to those by a human expert, making the contouring step in radiation treatment planning simpler and faster. Few cases still required manual corrections, mainly for heart and rectum.

Identifiants

pubmed: 35869525
doi: 10.1186/s13014-022-02102-6
pii: 10.1186/s13014-022-02102-6
pmc: PMC9308364
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

129

Subventions

Organisme : Bavarian Ministry of Economic Affairs, Regional Development and Energy
ID : 41-6618c/325/2-MED-1610-0003
Organisme : Bavarian Ministry of Economic Affairs, Regional Development and Energy
ID : 41-6618c/324/2-MED-1610-0002
Organisme : Bavarian Ministry of Economic Affairs, Regional Development and Energy
ID : 41-6618c/324/2-MED-1610-0002
Organisme : Bavarian Ministry of Economic Affairs, Regional Development and Energy
ID : 41-6618c/325/2-MED-1610-0003

Commentaires et corrections

Type : ErratumIn

Informations de copyright

© 2022. The Author(s).

Références

Nikolov S, Blackwell S, Mendes R, Fauw JD, Meyer C, Hughes C, et al. Deep learning to achieve clinically applicable segmentation of head and neck anatomy for radiotherapy. 2018:1–31.
van der Heyden B, Wohlfahrt P, Eekers DBP, Richter C, Terhaag K, Troost EGC, et al. Dual-energy CT for automatic organs-at-risk segmentation in brain-tumor patients using a multi-atlas and deep-learning approach. Sci Rep. 2019;9:4126.
doi: 10.1038/s41598-019-40584-9
Zhu W, Huang Y, Zeng L, Chen X, Liu Y, Qian Z, et al. AnatomyNet: Deep learning for fast and fully automated whole-volume segmentation of head and neck anatomy. Med Phys. 2019;46:576–89.
doi: 10.1002/mp.13300
Lim JY, Leech M. Use of auto-segmentation in the delineation of target volumes and organs at risk in head and neck. Acta Oncol. 2016;55:799–806.
doi: 10.3109/0284186X.2016.1173723
Feng M, Valdes G, Dixit N, Solberg TD. Machine learning in radiation oncology: opportunities, requirements, and needs. Front Oncol. 2018;8:110.
doi: 10.3389/fonc.2018.00110
Ronneberger O, Fischer P, Brox T. U-Net: Convolutional networks for biomedical image segmentation. Medical Image Computing and Computer-Assisted Intervention – MICCAI 2015;p. 234–41.
Ibragimov B, Xing L. Segmentation of organs-at-risks in head and neck CT images using convolutional neural networks. Med Phys. 2017;44:547–57.
doi: 10.1002/mp.12045
Kearney V, Chan JW, Valdes G, Solberg TD, Yom SS. The application of artificial intelligence in the IMRT planning process for head and neck cancer. Oral Oncol. 2018;87:111–6.
doi: 10.1016/j.oraloncology.2018.10.026
Ghesu FC, Georgescu B, Zheng Y, Grbic S, Maier A, Hornegger J, et al. Multi-scale deep reinforcement learning for real-time 3D-landmark detection in CT scans. IEEE Trans Pattern Anal Mach Intell. 2019;41:176–89.
doi: 10.1109/TPAMI.2017.2782687
Yang D, DX, Zhou SK, Bogdan G, Mingqing C, Sasa G, et al. Automatic liver segmentation using an adversarial image-to-image network. Springer, Cham, 2017.
Kingma DP, Ba J. Adam. A method for stochastic optimization. 2014;p. 1–15.
Julia White AT, Douglas A, Thomas B, Shannon M, Lawrence M, Lori P, Abraham Recht RR, Alphonse T, Frank V, Wendy W, Allen Li X. Breast cancer atlas for radiation therapy planning: consensus definitions. RTOG - Radiation Therapy Oncology Group.
Gay HA, Barthold HJ, O’Meara E, Bosch WR, El Naqa I, Al-Lozi R, et al. Pelvic normal tissue contouring guidelines for radiation therapy: a Radiation Therapy Oncology Group consensus panel atlas. Int J Radiat Oncol Biol Phys. 2012;83:e353-62.
doi: 10.1016/j.ijrobp.2012.01.023
Sharp G, Fritscher KD, Pekar V, Peroni M, Shusharina N, Veeraraghavan H, et al. Vision 20/20: perspectives on automated image segmentation for radiotherapy. Med Phys. 2014;41:050902.
doi: 10.1118/1.4871620
van Baardwijk A, Bosmans G, Boersma L, Buijsen J, Wanders S, Hochstenbag M, et al. PET-CT-based auto-contouring in non-small-cell lung cancer correlates with pathology and reduces interobserver variability in the delineation of the primary tumor and involved nodal volumes. Int J Radiat Oncol Biol Phys. 2007;68:771–8.
doi: 10.1016/j.ijrobp.2006.12.067
Kouwenhoven E, Giezen M, Struikmans H. Measuring the similarity of target volume delineations independent of the number of observers. Physics in Medicine and Biology. 2009;54:2863–73.
doi: 10.1088/0031-9155/54/9/018
Lorenzen EL, Taylor CW, Maraldo M, Nielsen MH, Offersen BV, Andersen MR, et al. Inter-observer variation in delineation of the heart and left anterior descending coronary artery in radiotherapy for breast cancer: a multi-centre study from Denmark and the UK. Radiother Oncol. 2013;108:254–8.
doi: 10.1016/j.radonc.2013.06.025
Kepka L, Bujko K, Garmol D, Palucki J, Zolciak-Siwinska A, Guzel-Szczepiorkowska Z, et al. Delineation variation of lymph node stations for treatment planning in lung cancer radiotherapy. Radiotherapy and Oncology. 2007;85:450–5.
doi: 10.1016/j.radonc.2007.10.028
Holyoake DL, Robinson M, Grose D, McIntosh D, Sebag-Montefiore D, Radhakrishna G, et al. Conformity analysis to demonstrate reproducibility of target volumes for Margin-Intense Stereotactic Radiotherapy for borderline-resectable pancreatic cancer. Radiother Oncol. 2016;121:86–91.
doi: 10.1016/j.radonc.2016.08.001
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, et al. Comparison and evaluation of methods for liver segmentation from CT datasets. IEEE Trans Med Imaging. 2009;28:1251–65.
doi: 10.1109/TMI.2009.2013851
V Y, Voiculescu I. An overview of current evaluation methods used in medical image segmentation. University of Oxford; 2015.
Taha AA, Hanbury A. An efficient algorithm for calculating the exact Hausdorff distance. IEEE Trans Pattern Anal Mach Intell. 2015;37:2153–63.
doi: 10.1109/TPAMI.2015.2408351
Delpon G, Escande A, Ruef T, Darreon J, Fontaine J, Noblet C, et al. Comparison of automated atlas-based segmentation software for postoperative prostate cancer radiotherapy. Front Oncol. 2016;6:178.
doi: 10.3389/fonc.2016.00178
Kim N, Chang JS, Kim YB, Kim JS. Atlas-based auto-segmentation for postoperative radiotherapy planning in endometrial and cervical cancers. Radiat Oncol. 2020;15:106.
doi: 10.1186/s13014-020-01562-y
Feng X, Qing K, Tustison NJ, Meyer CH, Chen Q. Deep convolutional neural network for segmentation of thoracic organs-at-risk using cropped 3D images. Med Phys. 2019;46:2169–80.
doi: 10.1002/mp.13466
Cardenas CE, Yang J, Anderson BM, Court LE, Brock KB. Advances in Auto-Segmentation. Semin Radiat Oncol. 2019;29:185–97.
doi: 10.1016/j.semradonc.2019.02.001
Sultana S, Robinson A, Song D, Lee J. Automatic multi-organ segmentation in computed tomography images using hierarchical convolutional neural network. J Med Imaging (Bellingham). 2020;7.
Lustberg T, van Soest J, Gooding M, Peressutti D, Aljabar P, van der Stoep J, et al. Clinical evaluation of atlas and deep learning based automatic contouring for lung cancer. Radiother Oncol. 2018;126:312–7.
doi: 10.1016/j.radonc.2017.11.012
Peulen H, Belderbos J, Guckenberger M, Hope A, Grills I, van Herk M, et al. Target delineation variability and corresponding margins of peripheral early stage NSCLC treated with stereotactic body radiotherapy. Radiother Oncol. 2015;114:361–6.
doi: 10.1016/j.radonc.2015.02.011
Joskowicz L, Cohen D, Caplan N, Sosna J. Inter-observer variability of manual contour delineation of structures in CT. Eur Radiol. 2019;29:1391–9.
doi: 10.1007/s00330-018-5695-5
Wong J, Fong A, McVicar N, Smith S, Giambattista J, Wells D, et al. Comparing deep learning-based auto-segmentation of organs at risk and clinical target volumes to expert inter-observer variability in radiotherapy planning. Radiother Oncol. 2020;144:152–8.
doi: 10.1016/j.radonc.2019.10.019
Hurkmans CW, Borger JH, Pieters BR, Russell NS, Jansen EPM, Mijnheer BJ. Variability in target volume delineation on CT scans of the breast. Int J Radiat Oncol Biol Phys. 2001;50:1366–72.
doi: 10.1016/S0360-3016(01)01635-2
Anders LC, Stieler F, Siebenlist K, Schafer J, Lohr F, Wenz F. Performance of an atlas-based autosegmentation software for delineation of target volumes for radiotherapy of breast and anorectal cancer. Radiother Oncol. 2012;102:68–73.
doi: 10.1016/j.radonc.2011.08.043
Kosmin M, Ledsam J, Romera-Paredes B, Mendes R, Moinuddin S, de Souza D, et al. Rapid advances in auto-segmentation of organs at risk and target volumes in head and neck cancer. Radiother Oncol. 2019;135:130–40.
doi: 10.1016/j.radonc.2019.03.004

Auteurs

Sebastian Marschner (S)

Department of Radiation Oncology, University Hospital, LMU Munich, Munich, Germany. sebastian.marschner@med.uni-muenchen.de.
Department of Radiation Oncology, LMU Klinikum, Marchioninistr. 15, 81377, München, Germany. sebastian.marschner@med.uni-muenchen.de.

Manasi Datar (M)

Technology Excellence, Digital Technology & Innovation, Siemens Healthineers, Erlangen, Germany.

Aurélie Gaasch (A)

Department of Radiation Oncology, University Hospital, LMU Munich, Munich, Germany.

Zhoubing Xu (Z)

Technology Excellence, Digital Technology & Innovation, Siemens Healthineers, Princeton, NJ, USA.

Sasa Grbic (S)

Technology Excellence, Digital Technology & Innovation, Siemens Healthineers, Princeton, NJ, USA.

Guillaume Chabin (G)

Technology Excellence, Digital Technology & Innovation, Siemens Healthineers, Princeton, NJ, USA.

Bernhard Geiger (B)

Technology Excellence, Digital Technology & Innovation, Siemens Healthineers, Princeton, NJ, USA.

Julian Rosenman (J)

Department of Radiation Oncology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.

Stefanie Corradini (S)

Department of Radiation Oncology, University Hospital, LMU Munich, Munich, Germany.

Maximilian Niyazi (M)

Department of Radiation Oncology, University Hospital, LMU Munich, Munich, Germany.

Tobias Heimann (T)

Technology Excellence, Digital Technology & Innovation, Siemens Healthineers, Erlangen, Germany.

Christian Möhler (C)

Cancer Therapy, Siemens Healthineers, Forchheim, Germany.

Fernando Vega (F)

Cancer Therapy, Siemens Healthineers, Forchheim, Germany.

Claus Belka (C)

Department of Radiation Oncology, University Hospital, LMU Munich, Munich, Germany.

Christian Thieke (C)

Department of Radiation Oncology, University Hospital, LMU Munich, Munich, Germany.

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