Metagenome-Assembled Genomes of

Acetobacteraceae Cellulose Metagenome Yeasts
Komagataeibacter Kombucha mars-like condition metagenome assembled genome whole metagenome

Journal

Journal of microbiology and biotechnology
ISSN: 1738-8872
Titre abrégé: J Microbiol Biotechnol
Pays: Korea (South)
ID NLM: 9431852

Informations de publication

Date de publication:
28 Aug 2022
Historique:
received: 07 04 2022
revised: 04 07 2022
accepted: 05 07 2022
pubmed: 26 7 2022
medline: 31 8 2022
entrez: 25 7 2022
Statut: ppublish

Résumé

Kombucha mutualistic community (KMC) is composed by acetic acid bacteria and yeasts, producing fermented tea with health benefits. As part of the BIOlogy and Mars EXperiment (BIOMEX) project, the effect of Mars-like conditions on the KMC was analyzed. Here, we analyzed metagenome-assembled genomes (MAGs) of the

Identifiants

DOI: 10.4014/jmb.2204.04009 PMID: 35879284 PMC: PMC9628956
pubmed: 35879284
pii: jmb.2204.04009
doi: 10.4014/jmb.2204.04009
pmc: PMC9628956
doi:

Substances chimiques

Cellulose 9004-34-6

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

967-975

Références

Mol Microbiol. 2008 Apr;68(1):4-16
pubmed: 18405343
Elife. 2021 May 04;10:
pubmed: 33944776
J Food Sci. 2020 Feb;85(2):455-464
pubmed: 31957879
Compr Rev Food Sci Food Saf. 2014 Jul;13(4):538-550
pubmed: 33412713
Int J Food Microbiol. 2020 Nov 16;333:108778
pubmed: 32731153
J Radiat Res. 2005 Mar;46(1):117-21
pubmed: 15802867
Cold Spring Harb Perspect Med. 2012 Nov 01;2(11):
pubmed: 23125205
J Mol Biol. 2016 Feb 22;428(4):726-731
pubmed: 26585406
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
J Food Prot. 2000 Jul;63(7):976-81
pubmed: 10914673
Int J Syst Evol Microbiol. 2016 Feb;66(2):1100-1103
pubmed: 26585518
J Bacteriol. 1988 Jul;170(7):3142-9
pubmed: 3290197
Nat Commun. 2016 Apr 13;7:11257
pubmed: 27071849
Appl Microbiol Biotechnol. 2011 Jul;91(1):17-30
pubmed: 21552989
Bioinformatics. 2015 May 15;31(10):1674-6
pubmed: 25609793
Appl Microbiol Biotechnol. 2018 Oct;102(19):8203-8211
pubmed: 30046857
Annu Rev Plant Physiol Plant Mol Biol. 1999 Jun;50:305-332
pubmed: 15012212
Astrobiology. 2019 Feb;19(2):183-196
pubmed: 30484685
J Biol Chem. 2000 Jul 21;275(29):22196-201
pubmed: 10896953
Curr Opin Microbiol. 2014 Apr;18:96-104
pubmed: 24657330
Annu Rev Genet. 2011;45:61-79
pubmed: 22060041
Nucleic Acids Res. 2019 Jan 8;47(D1):D23-D28
pubmed: 30395293
BMC Genomics. 2017 Nov 28;18(1):915
pubmed: 29183281
Environ Microbiol. 2021 Jul;23(7):3727-3742
pubmed: 33476085
Microbiol Resour Announc. 2021 Sep 9;10(36):e0054921
pubmed: 34498919
PLoS Biol. 2012;10(3):e1001281
pubmed: 22412352
Sci Rep. 2020 Feb 3;10(1):1723
pubmed: 32015354
Food Technol Biotechnol. 2018 Jun;56(2):139-151
pubmed: 30228790
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
FEMS Microbiol Rev. 2005 Sep;29(4):653-71
pubmed: 16102596
Annu Rev Genet. 2009;43:197-222
pubmed: 19686078
Nat Rev Microbiol. 2018 Sep;16(9):567-576
pubmed: 29789680
PeerJ. 2015 Oct 08;3:e1319
pubmed: 26500826
Science. 2011 Dec 16;334(6062):1551-3
pubmed: 22174252
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
BMC Bioinformatics. 2009 Dec 15;10:421
pubmed: 20003500

Auteurs

Imchang Lee (I)

Department of Life Science, Multidisciplinary Genome Institute, Hallym University, Chuncheon 24252, Republic of Korea.
Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, Republic of Korea.

Olga Podolich (O)

Institute of Molecular Biology and Genetics of NASU, Kyiv 03143, Ukraine.

Bertram Brenig (B)

Institute of Veterinary Medicine, Burckhardtweg, University of Göttingen, Göttingen 37073, Germany.

Sandeep Tiwari (S)

Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 6627, Brazil.

Vasco Azevedo (V)

Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 6627, Brazil.

Daniel Santana de Carvalho (DS)

Molecular and Computational Biology of Fungi Laboratory, Department of Microbiology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte 6627, Brazil.

Ana Paula Trovatti Uetanabaro (APT)

Molecular and Computational Biology of Fungi Laboratory, Department of Microbiology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte 6627, Brazil.

Aristóteles Góes-Neto (A)

Molecular and Computational Biology of Fungi Laboratory, Department of Microbiology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte 6627, Brazil.

Khalid J Alzahrani (KJ)

Department of Clinical Laboratories Sciences, College of Applied Medical Sciences, Taif University, Taif 21944, Saudi Arabia.

Oleg Reva (O)

Centre for Bioinformatics and Computational Biology, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0028, South Africa.

Natalia Kozyrovska (N)

Institute of Molecular Biology and Genetics of NASU, Kyiv 03143, Ukraine.

Jean-Pierre de Vera (JP)

Microgravity User Support Center (MUSC), German Aerospace Center (DLR), Cologne 51147, Germany.

Debmalya Barh (D)

Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais 6627, Brazil.
Institute of Integrative Omics and Applied Biotechnology (IIOAB), Nonakuri, Purba Medinipur, WB, 721172, India.

Bong-Soo Kim (BS)

Department of Life Science, Multidisciplinary Genome Institute, Hallym University, Chuncheon 24252, Republic of Korea.
The Korean Institute of Nutrition, Hallym University, Chuncheon 24252, Republic of Korea.

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Classifications MeSH

questionsmedicales.fr › Bactéries › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Acetobacteraceae › Metagenome-Assembled Genomes of
questionsmedicales.fr › Technologie, industrie et agriculture › Produits manufacturés › Matériaux biomédicaux et dentaires › Polymères › Biopolymères › Cellulose › Metagenome-Assembled Genomes of
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Métagénome › Metagenome-Assembled Genomes of
questionsmedicales.fr › Eucaryotes › Champignons › Levures › Metagenome-Assembled Genomes of