Ecological Observations Based on Functional Gene Sequencing Are Sensitive to the Amplicon Processing Method.

Ammonia / metabolism Archaea Bayes Theorem RNA, Ribosomal, 16S / genetics Reproducibility of Results
amplicon sequence variant amplicon sequencing coastal sediments functional genes nitrogen cycle

Journal

mSphere
ISSN: 2379-5042
Titre abrégé: mSphere
Pays: United States
ID NLM: 101674533

Informations de publication

Date de publication:
31 08 2022
Historique:
pubmed: 9 8 2022
medline: 9 9 2022
entrez: 8 8 2022
Statut: ppublish

Résumé

Until recently, the

Identifiants

DOI: 10.1128/msphere.00324-22 PMID: 35938727 PMC: PMC9429940
pubmed: 35938727
doi: 10.1128/msphere.00324-22
pmc: PMC9429940
doi:

Substances chimiques

RNA, Ribosomal, 16S 0
Ammonia 7664-41-7

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0032422

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Auteurs

Fabien Cholet (F)

Infrastructure and Environment, James Watt School of Engineering, University of Glasgowgrid.8756.c, Glasgow, Scotland.
ORCID: 0000-0003-0638-9224

Agata Lisik (A)

Microbiology, School of Natural Sciences, National University of Ireland, Galwaygrid.6142.1, Ireland.

Hélène Agogué (H)

Université de La Rochelle, CNRS, UMR 7266, LIENSs, La Rochelle, France.

Umer Z Ijaz (UZ)

Infrastructure and Environment, James Watt School of Engineering, University of Glasgowgrid.8756.c, Glasgow, Scotland.

Philippe Pineau (P)

Université de La Rochelle, CNRS, UMR 7266, LIENSs, La Rochelle, France.

Nicolas Lachaussée (N)

Université de La Rochelle, CNRS, UMR 7266, LIENSs, La Rochelle, France.

Cindy J Smith (CJ)

Infrastructure and Environment, James Watt School of Engineering, University of Glasgowgrid.8756.c, Glasgow, Scotland.
ORCID: 0000-0003-4905-0730

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Classifications MeSH

questionsmedicales.fr › Produits chimiques inorganiques › Composés de l'azote › Ammoniac › Ecological Observations Based on Functional...
questionsmedicales.fr › Archéobactéries › Ecological Observations Based on Functional...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Statistiques comme sujet › Probabilité › Théorème de Bayes › Ecological Observations Based on Functional...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN ribosomique › ARN ribosomique 16S › Ecological Observations Based on Functional...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Méthodologie en recherche épidémiologique › Reproductibilité des résultats › Ecological Observations Based on Functional...