Calcium-induced environmental adaptability of the blood protein vitronectin.

Calcium / metabolism Vitronectin / chemistry Protein Binding Hemopexin / metabolism Binding Sites Crystallography, X-Ray Protein Conformation

Journal

Biophysical journal
ISSN: 1542-0086
Titre abrégé: Biophys J
Pays: United States
ID NLM: 0370626

Informations de publication

Date de publication:
18 10 2022
Historique:
received: 19 03 2022
revised: 29 06 2022
accepted: 29 08 2022
pubmed: 4 9 2022
medline: 22 10 2022
entrez: 3 9 2022
Statut: ppublish

Résumé

The adaptability of proteins to their work environments is fundamental for cellular life. Here, we describe how the hemopexin-like domain of the multifunctional blood glycoprotein vitronectin binds Ca

Identifiants

DOI: 10.1016/j.bpj.2022.08.044 PMID: 36056555 PMC: PMC9674982
pubmed: 36056555
pii: S0006-3495(22)00726-3
doi: 10.1016/j.bpj.2022.08.044
pmc: PMC9674982
pii:
doi:

Substances chimiques

Calcium SY7Q814VUP
Vitronectin 0
Hemopexin 9013-71-2

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

3896-3906

Subventions

Organisme : NCI NIH HHS
ID : P30 CA030199
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM118186
Pays : United States

Informations de copyright

Copyright © 2022 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of interests Authors declare no conflict of interest.

Références

Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67
pubmed: 21460454
J Mol Biol. 1997 Jun 20;269(4):631-43
pubmed: 9217266
Proc Natl Acad Sci U S A. 1985 Sep;82(17):5766-70
pubmed: 2412224
Mol Microbiol. 2020 Sep;114(3):510-520
pubmed: 32462782
Nat Commun. 2011 Jul 12;2:385
pubmed: 21750539
Proc Natl Acad Sci U S A. 2017 May 2;114(18):4673-4678
pubmed: 28416674
FASEB J. 1999 Mar;13(3):477-84
pubmed: 10064614
FASEB J. 2000 May;14(7):835-46
pubmed: 10783137
J Biol Chem. 1986 Dec 15;261(35):16698-703
pubmed: 2430969
Biochemistry. 1998 May 5;37(18):6351-60
pubmed: 9572850
Biochemistry. 1990 Aug 7;29(31):7133-55
pubmed: 2207096
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42
pubmed: 21460441
Invest Ophthalmol Vis Sci. 1999 Dec;40(13):3305-15
pubmed: 10586957
Proc Natl Acad Sci U S A. 2007 Oct 30;104(44):17261-5
pubmed: 17956984
J Clin Invest. 2006 Feb;116(2):378-85
pubmed: 16453022
Semin Thromb Hemost. 2011 Jun;37(4):408-24
pubmed: 21805447
Protein Sci. 2001 Jun;10(6):1187-94
pubmed: 11369857
Acta Pathol Microbiol Immunol Scand Suppl. 1984;284:89-96
pubmed: 6587746
J Thromb Thrombolysis. 2002 Dec;14(3):221-5
pubmed: 12913402
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):12-21
pubmed: 20057044
Proteomics. 2004 Jan;4(1):244-56
pubmed: 14730686
J Biol Chem. 2016 Sep 30;291(40):20849-20857
pubmed: 27462077
Mol Microbiol. 2010 Nov;78(3):545-60
pubmed: 20807208
Arterioscler Thromb Vasc Biol. 1998 Feb;18(2):168-76
pubmed: 9484980
Sci Rep. 2021 May 4;11(1):9523
pubmed: 33947944
Prog Hemost Thromb. 1991;10:269-305
pubmed: 1706881
Mol Neurodegener. 2008 Oct 21;3:16
pubmed: 18939994
Structure. 2015 Feb 3;23(2):257-69
pubmed: 25651059
Ann N Y Acad Sci. 2011 Dec;1240:1-6
pubmed: 22172032
Nat Struct Biol. 2003 Jul;10(7):541-4
pubmed: 12808446
Proc Natl Acad Sci U S A. 2020 Aug 4;117(31):18504-18510
pubmed: 32699145
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W210-4
pubmed: 21576220
J Comput Chem. 2009 Jul 30;30(10):1545-614
pubmed: 19444816
J Comput Chem. 2008 Aug;29(11):1859-65
pubmed: 18351591
Blood. 2011 Apr 28;117(17):4623-31
pubmed: 21385852
Biochem Biophys Res Commun. 1999 May 19;258(3):524-9
pubmed: 10329419
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501
pubmed: 20383002
Protein Expr Purif. 2006 Apr;46(2):406-13
pubmed: 16214368
Sci Adv. 2019 Sep 11;5(9):eaax5068
pubmed: 31535027
Acta Crystallogr D Struct Biol. 2017 Mar 1;73(Pt 3):223-233
pubmed: 28291757
Arterioscler Thromb Vasc Biol. 2004 Dec;24(12):2251-6
pubmed: 15458976
Biopolymers. 2011 Nov;95(11):733-45
pubmed: 21544798
Circ Res. 2007 Jun 22;100(12):1673-85
pubmed: 17585075
Protein Eng. 2000 Mar;13(3):179-91
pubmed: 10775659
J Chem Theory Comput. 2013 Jan 8;9(1):461-469
pubmed: 23316124
IUBMB Life. 2013 Oct;65(10):807-18
pubmed: 24030926
Neurosci Lett. 1998 Jul 24;251(2):109-12
pubmed: 9718986
Prog Retin Eye Res. 2019 May;70:55-84
pubmed: 30572124
J Clin Invest. 2007 Mar;117(3):746-56
pubmed: 17332893

Auteurs

Ye Tian (Y)

Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.

Kyungsoo Shin (K)

Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.

Alexander E Aleshin (AE)

Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.

Wonpil Im (W)

Departments of Biological Sciences, Chemistry, and Bioengineering, Lehigh University, Bethlehem, Pennsylvania.

Francesca M Marassi (FM)

Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California. Electronic address: fmarassi@sbp.edu.

Articles similaires

Trace elements in psoriasis presentation and treatment.

Pratiksha Patra, Tyler Harrison
1.00
Psoriasis Humans Magnesium Zinc Trace Elements

Membrane potential stimulates ADP import and ATP export by the mitochondrial ADP/ATP carrier due to its positively charged binding site.

Vasiliki Mavridou, Martin S King, Andre Bazzone et al.
1.00
Adenosine Triphosphate Adenosine Diphosphate Mitochondrial ADP, ATP Translocases Binding Sites Mitochondria

Conservation of the cooling agent binding pocket within the TRPM subfamily.

Kate Huffer, Matthew C S Denley, Elisabeth V Oskoui et al.
1.00
TRPM Cation Channels Animals Binding Sites Mice Pyrimidinones

Drug repurposing against fucosyltransferase-2 via docking, STD-NMR, and molecular dynamic simulation studies.

Muhammad Atif, Humaira Zafar, Atia-Tul- Wahab et al.
1.00
Fucosyltransferases Drug Repositioning Molecular Docking Simulation Molecular Dynamics Simulation Humans

Classifications MeSH

questionsmedicales.fr › Facteurs biologiques › Facteurs de la coagulation sanguine › Calcium › Calcium-induced environmental adaptability of...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Scléroprotéines › Protéines de la matrice extracellulaire › Vitronectine › Calcium-induced environmental adaptability of...
questionsmedicales.fr › Métabolisme › Liaison aux protéines › Calcium-induced environmental adaptability of...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Glycoprotéines › Hémopexine › Calcium-induced environmental adaptability of...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Sites de fixation › Calcium-induced environmental adaptability of...
questionsmedicales.fr › Techniques d'investigation › Techniques de chimie analytique › Cristallographie aux rayons X › Calcium-induced environmental adaptability of...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Conformation moléculaire › Conformation des protéines › Calcium-induced environmental adaptability of...