Epidemiological investigation of infectious diseases in geese on mainland China during 2018-2021.
co-infections
epidemiological investigation
evolutionary characteristics
geese
phylogenetic analysis
viruses
Journal
Transboundary and emerging diseases
ISSN: 1865-1682
Titre abrégé: Transbound Emerg Dis
Pays: Germany
ID NLM: 101319538
Informations de publication
Date de publication:
Nov 2022
Nov 2022
Historique:
revised:
22
08
2022
received:
21
06
2022
accepted:
03
09
2022
pubmed:
12
9
2022
medline:
7
2
2023
entrez:
11
9
2022
Statut:
ppublish
Résumé
Geese play an important role in agricultural economics, with China producing the vast majority of goose meat consumed worldwide annually. The variations in the avian viruses and co-infections result in substantial economic losses to the goose industry in China. To understand the evolutionary characteristics and co-infections of viruses, a broad epidemiological investigation of epizootic viruses of goose was carried out in nine provinces of China during 2018-2021. Here, the results indicated that, among the 1970 clinical samples, 50.81% (1001/1970) were positive for goose astrovirus (GAstV), 18.22% (359/1970) for avian orthoreovirus, 12.74% (251/1970) for goose parvovirus, 11.02% (217/1970) for H9N2 subtype avian influenza virus, 4.01% (79/1970) for Newcastle disease virus, and 2.08% (41/1970) for fowl adenovirus. Among the six viruses, co-infections comprised a large proportion (66.37%) in the field, of which the dual infection was more common. Additionally, phylogenetic analysis of GAstVs indicated that Chinese GAstVs had formed two distinct groups, that is, GAstV-1 and GAstV-2. GAstV-2 sub-genotype II-c had arisen as the dominant genotype in the whole country. Notably, all the H9N2-AIV isolated strains harboured the mammalian adaptation markers I155T, H183N, and Q226L (H3 numbering) in the HA gene, which promotes preferential binding to human-like α2-6-linked sialic acid receptors. And beyond that, we determined that the goose-origin Muscovy Duck Reovirus isolates, showing 51.7%-96% similarities to that of other waterfowl-origin orthoreovirus isolates in sequence homology analysis of the representative part of σC, are a new variant of waterfowl-origin orthoreovirus. These data provide valuable information about the prevalence of infectious diseases in geese on mainland China.
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
3419-3432Subventions
Organisme : China Agriculture Research System of MOF and MARA
ID : CARS-42-19
Organisme : National Natural Science Foundation of China
ID : 31872500
Organisme : National Natural Science Foundation of China
ID : 32172845
Organisme : Natural Science Foundation of Shandong Province
ID : ZR2020MC183
Organisme : Higher Education Support Program of Youth Innovation and Technology of Shandong Province, China
ID : 2019KJF022
Informations de copyright
© 2022 Wiley-VCH GmbH.
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