Analysis of Zika Virus Sequence Data Associated with a School Cohort in Haiti.
Journal
The American journal of tropical medicine and hygiene
ISSN: 1476-1645
Titre abrégé: Am J Trop Med Hyg
Pays: United States
ID NLM: 0370507
Informations de publication
Date de publication:
12 10 2022
12 10 2022
Historique:
received:
14
03
2022
accepted:
11
05
2022
pubmed:
13
9
2022
medline:
19
10
2022
entrez:
12
9
2022
Statut:
epublish
Résumé
Zika virus (ZIKV) infections occurred in epidemic form in the Americas in 2014-2016, with some of the earliest isolates in the region coming from Haiti. We isolated ZIKV from 20 children with acute undifferentiated febrile illness who were part of a cohort of children seen at a school clinic in the Gressier region of Haiti. The virus was also isolated from three pools of Aedes aegypti mosquitoes collected at the same location. On phylogenetic analysis, three distinct ZIKV clades were identified. Strains from all three clades were present in Haiti in 2014, making them among the earliest isolates identified in the Western Hemisphere. Strains from all three clades were also isolated in 2016, indicative of their persistence across the time period of the epidemic. Mosquito isolates were collected in 2016 and included representatives from two of the three clades; in one instance, ZIKV was isolated from a pool of male mosquitoes, suggestive of vertical transmission of the virus. The identification of multiple ZIKV clades in Haiti at the beginning of the epidemic suggests that Haiti served as a nidus for transmission within the Caribbean.
Identifiants
pubmed: 36096408
doi: 10.4269/ajtmh.22-0204
pii: tpmd220204
pmc: PMC9651511
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
873-880Subventions
Organisme : NIAID NIH HHS
ID : R01 AI126357
Pays : United States
Références
Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):9294-9299
pubmed: 30150394
Bioinformatics. 2002 Mar;18(3):502-4
pubmed: 11934758
Clin Infect Dis. 2019 Mar 5;68(6):919-926
pubmed: 30184178
Int J Infect Dis. 2019 Oct;87:151-153
pubmed: 31382049
Bioinformatics. 2016 Jul 1;32(13):1933-42
pubmed: 27153688
Virus Genes. 2020 Oct;56(5):632-637
pubmed: 32542479
Parasit Vectors. 2019 Oct 2;12(1):463
pubmed: 31578140
Insect Biochem Mol Biol. 2008 Feb;38(2):176-89
pubmed: 18207079
Nat Methods. 2017 Jun;14(6):587-589
pubmed: 28481363
Nature. 2017 Jun 15;546(7658):401-405
pubmed: 28538723
Sci Rep. 2017 Aug 18;7(1):8718
pubmed: 28821712
N Engl J Med. 2009 Jun 11;360(24):2536-43
pubmed: 19516034
PLoS Negl Trop Dis. 2016 Apr 25;10(4):e0004687
pubmed: 27111294
Structure. 2018 Apr 3;26(4):555-564.e3
pubmed: 29526431
Trop Med Int Health. 2012 Feb;17(2):235-43
pubmed: 22040518
Virus Evol. 2018 Jan 08;4(1):vex042
pubmed: 29340210
Sci Transl Med. 2021 Oct 06;13(614):eabg9478
pubmed: 34613812
Microbes Infect. 2018 Dec;20(11-12):646-660
pubmed: 29481868
PLoS Negl Trop Dis. 2018 May 31;12(5):e0006505
pubmed: 29851952
Proc Natl Acad Sci U S A. 1997 Jun 24;94(13):6815-9
pubmed: 9192648
Emerg Infect Dis. 2007 May;13(5):764-7
pubmed: 17553261
Viruses. 2018 Dec 25;11(1):
pubmed: 30585228
Am J Trop Med Hyg. 2017 Jan 11;96(1):144-147
pubmed: 27799635
Mem Inst Oswaldo Cruz. 2016 Oct;111(10):655-658
pubmed: 27706382
Emerg Infect Dis. 2008 Aug;14(8):1232-9
pubmed: 18680646
Science. 2019 Feb 8;363(6427):607-610
pubmed: 30733412
Nature. 2017 May 25;545(7655):482-486
pubmed: 28514450
J Med Entomol. 2010 Jan;47(1):89-94
pubmed: 20180313
Emerg Infect Dis. 2017 May;23(5):880-882
pubmed: 28277199
Mol Biol Evol. 2018 Feb 1;35(2):518-522
pubmed: 29077904
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
Virus Res. 2020 Jan 2;275:197793
pubmed: 31676367
J Virol. 2007 Nov;81(21):11809-16
pubmed: 17715229
Sci Rep. 2019 Dec 27;9(1):20151
pubmed: 31882976
Cell Stem Cell. 2016 Nov 3;19(5):663-671
pubmed: 27524440
PLoS Negl Trop Dis. 2019 Jan 10;13(1):e0006972
pubmed: 30629592
Virus Evol. 2016 Apr 09;2(1):vew007
pubmed: 27774300
BMC Evol Biol. 2011 Feb 10;11:41
pubmed: 21310052
PLoS Negl Trop Dis. 2013 Jul 11;7(7):e2311
pubmed: 23875046
Virus Evol. 2017 Aug 03;3(2):vex020
pubmed: 28852573
J Med Entomol. 2017 Jul 1;54(4):1085-1087
pubmed: 28419254
Emerg Infect Dis. 2016 Nov;22(11):2000-2002
pubmed: 27767924
Emerg Infect Dis. 2018 Sep;24(9):1765-1767
pubmed: 30124422
Am J Trop Med Hyg. 2015 Apr;92(4):752-757
pubmed: 25732684
PLoS One. 2018 May 10;13(5):e0196857
pubmed: 29746539
Am J Trop Med Hyg. 2004 Apr;70(4):339-45
pubmed: 15100444