Recent progress in atomistic modeling of light-harvesting complexes: a mini review.
Excited state calculations
Exciton dynamics
Light-harvesting complexes
Multiscale modeling
QM/MM simulations
Spectral densities
Journal
Photosynthesis research
ISSN: 1573-5079
Titre abrégé: Photosynth Res
Pays: Netherlands
ID NLM: 100954728
Informations de publication
Date de publication:
Apr 2023
Apr 2023
Historique:
received:
30
06
2022
accepted:
22
09
2022
medline:
5
4
2023
pubmed:
8
10
2022
entrez:
7
10
2022
Statut:
ppublish
Résumé
In this mini review, we focus on recent advances in the atomistic modeling of biological light-harvesting (LH) complexes. Because of their size and sophisticated electronic structures, multiscale methods are required to investigate the dynamical and spectroscopic properties of such complexes. The excitation energies, in this context also known as site energies, excitonic couplings, and spectral densities are key quantities which usually need to be extracted to be able to determine the exciton dynamics and spectroscopic properties. The recently developed multiscale approach based on the numerically efficient density functional tight-binding framework followed by excited state calculations has been shown to be superior to the scheme based on pure classical molecular dynamics simulations. The enhanced approach, which improves the description of the internal vibrational dynamics of the pigment molecules, yields spectral densities in good agreement with the experimental counterparts for various bacterial and plant LH systems. Here, we provide a brief overview of those results and described the theoretical foundation of the multiscale protocol.
Identifiants
pubmed: 36207489
doi: 10.1007/s11120-022-00969-w
pii: 10.1007/s11120-022-00969-w
pmc: PMC10070314
doi:
Substances chimiques
Light-Harvesting Protein Complexes
0
Types de publication
Journal Article
Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
147-162Subventions
Organisme : Deutsche Forschungsgemeinschaft
ID : KL-1299/18-1
Organisme : Deutsche Forschungsgemeinschaft
ID : KL-1299/24-1
Informations de copyright
© 2022. The Author(s).
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