Validation and Improvement of a Convolutional Neural Network to Predict the Involved Pathology in a Head and Neck Surgery Cohort.


Journal

International journal of environmental research and public health
ISSN: 1660-4601
Titre abrégé: Int J Environ Res Public Health
Pays: Switzerland
ID NLM: 101238455

Informations de publication

Date de publication:
26 09 2022
Historique:
received: 30 08 2022
revised: 19 09 2022
accepted: 22 09 2022
entrez: 14 10 2022
pubmed: 15 10 2022
medline: 18 10 2022
Statut: epublish

Résumé

The selection of patients for the constitution of a cohort is a major issue for clinical research (prospective studies and retrospective studies in real life). Our objective was to validate in real life conditions the use of a Deep Learning process based on a neural network, for the classification of patients according to the pathology involved in a head and neck surgery department. 24,434 Electronic Health Records (EHR) from the first visit between 2000 and 2020 were extracted. More than 6000 EHR were manually classified in ten groups of interest according to the reason for consultation with a clinical relevance. A convolutional neural network (TensorFlow, previously reported by Hsu et al.) was then used to predict the group of patients based on their pathology, using two levels of classification based on clinically relevant criteria. On the first and second level of classification, macro-average performances were: 0.95, 0.83, 0.85, 0.97, 0.84 and 0.93, 0.76, 0.83, 0.96, 0.79 for accuracy, recall, precision, specificity and F1-score versus accuracy, recall and precision of 0.580, 580 and 0.582 for Hsu et al., respectively. We validated this model to predict the pathology involved and to constitute clinically relevant cohorts in a tertiary hospital. This model did not require a preprocessing stage, was used in French and showed equivalent or better performances than other already published techniques.

Identifiants

pubmed: 36231500
pii: ijerph191912200
doi: 10.3390/ijerph191912200
pmc: PMC9564535
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

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Auteurs

Dorian Culié (D)

Head and Neck Surgery Department, Antoine Laccassagne Center, 06100 Nice, France.
Epidemiology, Biostatistics and Health Data Department, Antoine Laccassagne Center, 06100 Nice, France.

Renaud Schiappa (R)

Epidemiology, Biostatistics and Health Data Department, Antoine Laccassagne Center, 06100 Nice, France.

Sara Contu (S)

Epidemiology, Biostatistics and Health Data Department, Antoine Laccassagne Center, 06100 Nice, France.

Boris Scheller (B)

Head and Neck Surgery Department, Antoine Laccassagne Center, 06100 Nice, France.
Epidemiology, Biostatistics and Health Data Department, Antoine Laccassagne Center, 06100 Nice, France.

Agathe Villarme (A)

Head and Neck Surgery Department, Antoine Laccassagne Center, 06100 Nice, France.

Olivier Dassonville (O)

Head and Neck Surgery Department, Antoine Laccassagne Center, 06100 Nice, France.

Gilles Poissonnet (G)

Head and Neck Surgery Department, Antoine Laccassagne Center, 06100 Nice, France.

Alexandre Bozec (A)

Head and Neck Surgery Department, Antoine Laccassagne Center, 06100 Nice, France.
Epidemiology, Biostatistics and Health Data Department, Antoine Laccassagne Center, 06100 Nice, France.

Emmanuel Chamorey (E)

Epidemiology, Biostatistics and Health Data Department, Antoine Laccassagne Center, 06100 Nice, France.

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