Rapid reconstruction of neural circuits using tissue expansion and light sheet microscopy.

D. melanogaster connectomics image analysis light sheet microscopy neuroscience plasticity synapse variability

Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
26 Oct 2022
Historique:
received: 20 06 2022
accepted: 25 10 2022
pubmed: 27 10 2022
medline: 16 11 2022
entrez: 26 10 2022
Statut: epublish

Résumé

Brain function is mediated by the physiological coordination of a vast, intricately connected network of molecular and cellular components. The physiological properties of neural network components can be quantified with high throughput. The ability to assess many animals per study has been critical in relating physiological properties to behavior. By contrast, the synaptic structure of neural circuits is presently quantifiable only with low throughput. This low throughput hampers efforts to understand how variations in network structure relate to variations in behavior. For neuroanatomical reconstruction, there is a methodological gulf between electron microscopic (EM) methods, which yield dense connectomes at considerable expense and low throughput, and light microscopic (LM) methods, which provide molecular and cell-type specificity at high throughput but without synaptic resolution. To bridge this gulf, we developed a high-throughput analysis pipeline and imaging protocol using tissue expansion and light sheet microscopy (ExLLSM) to rapidly reconstruct selected circuits across many animals with single-synapse resolution and molecular contrast. Using

Identifiants

pubmed: 36286237
doi: 10.7554/eLife.81248
pii: 81248
pmc: PMC9651950
doi:
pii:

Banques de données

Dryad
['10.5061/dryad.5hqbzkh8b']

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Howard Hughes Medical Institute
Pays : United States

Informations de copyright

© 2022, Lillvis et al.

Déclaration de conflit d'intérêts

JL, HO, XD, IP, TK, JC, KR, CG, AH, KW, JB, DM, LM, BM, SS, BD No competing interests declared, RG, PT is a co-inventor on multiple patents related to expansion microscopy, EB is a co-inventor on multiple patents related to expansion microscopy and is also a co-founder of a company that aims to pursue commercial deployment of expansion microscopy-related technology

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Auteurs

Joshua L Lillvis (JL)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Hideo Otsuna (H)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Xiaoyu Ding (X)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Igor Pisarev (I)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Takashi Kawase (T)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Jennifer Colonell (J)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Konrad Rokicki (K)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Cristian Goina (C)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Ruixuan Gao (R)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.
MIT McGovern Institute for Brain Research, Cambridge, United States.
Departments of Chemistry and Biological Sciences, University of Illinois Chicago, Chicago, United States.

Amy Hu (A)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Kaiyu Wang (K)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

John Bogovic (J)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Daniel E Milkie (DE)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Linus Meienberg (L)

ETH Zurich, Zurich, Switzerland.

Brett D Mensh (BD)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Edward S Boyden (ES)

MIT McGovern Institute for Brain Research, Cambridge, United States.
Howard Hughes Medical Institute, Cambridge, United States.

Stephan Saalfeld (S)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Paul W Tillberg (PW)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.

Barry J Dickson (BJ)

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States.
Queensland Brain Institute, The University of Queensland, St Lucia, Australia.

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