Temporal derivative computation in the dorsal raphe network revealed by an experimentally driven augmented integrate-and-fire modeling framework.

adaptation computational biology dorsal raphe medial prefrontal cortex mouse neuroscience serotonin single neuron models spiking neural networks systems biology

Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
19 01 2023
Historique:
received: 10 08 2021
accepted: 19 12 2022
pubmed: 20 1 2023
medline: 3 3 2023
entrez: 19 1 2023
Statut: epublish

Résumé

By means of an expansive innervation, the serotonin (5-HT) neurons of the dorsal raphe nucleus (DRN) are positioned to enact coordinated modulation of circuits distributed across the entire brain in order to adaptively regulate behavior. Yet the network computations that emerge from the excitability and connectivity features of the DRN are still poorly understood. To gain insight into these computations, we began by carrying out a detailed electrophysiological characterization of genetically identified mouse 5-HT and somatostatin (SOM) neurons. We next developed a single-neuron modeling framework that combines the realism of Hodgkin-Huxley models with the simplicity and predictive power of generalized integrate-and-fire models. We found that feedforward inhibition of 5-HT neurons by heterogeneous SOM neurons implemented divisive inhibition, while endocannabinoid-mediated modulation of excitatory drive to the DRN increased the gain of 5-HT output. Our most striking finding was that the output of the DRN encodes a mixture of the intensity and temporal derivative of its input, and that the temporal derivative component dominates this mixture precisely when the input is increasing rapidly. This network computation primarily emerged from prominent adaptation mechanisms found in 5-HT neurons, including a previously undescribed dynamic threshold. By applying a bottom-up neural network modeling approach, our results suggest that the DRN is particularly apt to encode input changes over short timescales, reflecting one of the salient emerging computations that dominate its output to regulate behavior.

Identifiants

pubmed: 36655738
doi: 10.7554/eLife.72951
pii: 72951
pmc: PMC9977298
doi:
pii:

Substances chimiques

Serotonin 333DO1RDJY

Banques de données

Dryad
['10.5061/dryad.66t1g1k2w']

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : CIHR
ID : 175325
Pays : Canada
Organisme : CIHR
ID : 175319
Pays : Canada

Informations de copyright

© 2023, Harkin et al.

Déclaration de conflit d'intérêts

EH, ML, AP, JB, LC, DC, CS, AL, RN, JB No competing interests declared

Références

Brain Res. 1982 Apr 29;238(2):463-9
pubmed: 6284300
J Comp Neurol. 2015 Jul 1;523(10):1488-504
pubmed: 25652113
J Neurophysiol. 1991 Oct;66(4):1176-89
pubmed: 1761979
Nat Rev Neurosci. 2020 Feb;21(2):80-92
pubmed: 31911627
J Neurophysiol. 2009 Nov;102(5):3026-37
pubmed: 19710375
Nature. 1985 Jun 6-12;315(6019):501-3
pubmed: 2582271
Neuron. 2020 May 6;106(3):388-403.e18
pubmed: 32142648
Neuropsychopharmacology. 2011 Jan;36(1):74-97
pubmed: 20881948
Nat Neurosci. 2004 Dec;7(12):1345-52
pubmed: 15558066
J Neurophysiol. 1983 Apr;49(4):1036-50
pubmed: 6854356
Neuron. 2022 Aug 17;110(16):2664-2679.e8
pubmed: 35700737
Nat Neurosci. 2013 Jul;16(7):942-8
pubmed: 23749146
Prog Neurobiol. 2009 May;88(1):17-31
pubmed: 19428959
J Physiol. 1971 Feb;213(1):31-53
pubmed: 5575343
J Neurosci. 2004 May 19;24(20):4807-17
pubmed: 15152041
Psychopharmacology (Berl). 1985;87(2):173-7
pubmed: 3931142
J Neurosci. 2003 Apr 1;23(7):2686-95
pubmed: 12684454
Neuron. 2000 Jun;26(3):695-702
pubmed: 10896164
J Neurophysiol. 2007 May;97(5):3155-64
pubmed: 17344377
Brain Res. 1985 Dec 16;359(1-2):347-50
pubmed: 3000524
Neural Comput. 2000 Jan;12(1):43-89
pubmed: 10636933
PLoS Comput Biol. 2016 Feb 23;12(2):e1004761
pubmed: 26907675
Curr Biol. 2022 Feb 7;32(3):586-599.e7
pubmed: 34936883
PLoS Comput Biol. 2015 Jun 17;11(6):e1004275
pubmed: 26083597
Cell Rep. 2017 Mar 21;18(12):3018-3032
pubmed: 28329692
Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):E5361-70
pubmed: 26354124
Elife. 2015 Feb 25;4:
pubmed: 25714923
Arch Gen Psychiatry. 1994 Nov;51(11):865-74
pubmed: 7944875
Brain Res. 1979 Mar 9;163(1):135-50
pubmed: 218676
Nat Commun. 2018 Jun 26;9(1):2477
pubmed: 29946069
Brain Res. 1981 Jan 5;204(1):1-11
pubmed: 6166350
Proc Natl Acad Sci U S A. 2007 Jun 5;104(23):9870-5
pubmed: 17535909
Curr Biol. 2015 Feb 2;25(3):306-315
pubmed: 25601545
J Pharmacol Exp Ther. 2007 Jan;320(1):376-85
pubmed: 17005915
Biophys J. 1977 Apr;18(1):81-102
pubmed: 856318
Neuropharmacology. 2011 Sep;61(3):382-6
pubmed: 21251917
Neuron. 2018 Nov 7;100(3):579-592.e5
pubmed: 30408443
Elife. 2017 Mar 21;6:
pubmed: 28322190
Science. 2009 Oct 16;326(5951):379-80
pubmed: 19833951
Front Comput Neurosci. 2014 Sep 12;8:107
pubmed: 25309409
Annu Rev Neurosci. 2009;32:95-126
pubmed: 19400722
Nat Commun. 2016 Jan 28;7:10503
pubmed: 26818705
J Physiol. 1989 Feb;409:171-90
pubmed: 2585290
J Neurosci. 2005 Jan 26;25(4):936-40
pubmed: 15673674
Neuron. 2012 Oct 4;76(1):1-11
pubmed: 23040802
Nature. 2007 Jun 28;447(7148):1111-5
pubmed: 17522629
J Neurosci. 2008 May 14;28(20):5331-43
pubmed: 18480289
Nature. 1997 Jun 26;387(6636):869-75
pubmed: 9202119
Nat Commun. 2018 Feb 19;9(1):709
pubmed: 29459723
Neural Netw. 2002 Jun-Jul;15(4-6):495-506
pubmed: 12371507
Curr Opin Neurobiol. 2013 Jun;23(3):399-406
pubmed: 23385115
Curr Opin Neurobiol. 2019 Oct;58:78-85
pubmed: 31419712
Stress. 2005 Dec;8(4):233-46
pubmed: 16423712
J Vis. 2006 Apr 28;6(4):414-28
pubmed: 16889478
Front Comput Neurosci. 2014 Feb 25;8:19
pubmed: 24616694
Nature. 2012 Dec 20;492(7429):428-32
pubmed: 23160494
Neuron. 2000 Nov;28(2):335-41
pubmed: 11144343
Neural Comput. 1998 Oct 1;10(7):1721-9
pubmed: 9744894
Neuropsychopharmacology. 2011 Jan;36(1):98-113
pubmed: 20736991
PLoS Comput Biol. 2012;8(10):e1002711
pubmed: 23055914
Neural Comput. 2003 Nov;15(11):2523-64
pubmed: 14577853
J Neurosci Methods. 2008 Apr 30;169(2):417-24
pubmed: 18160135
Brain Res. 1983 Dec 19;289(1-2):109-19
pubmed: 6140982
J Gen Physiol. 1972 Jun;59(6):734-66
pubmed: 5025748
J Neurophysiol. 2012 Mar;107(6):1756-75
pubmed: 22157113
Nat Commun. 2018 Jun 1;9(1):2048
pubmed: 29858574
Neuroscience. 2010 Dec 29;171(4):1209-15
pubmed: 20888395
Prog Neurobiol. 2014 Jul;118:59-101
pubmed: 24784445
Proc Natl Acad Sci U S A. 2016 May 10;113(19):5429-34
pubmed: 27114535
PLoS Comput Biol. 2009 May;5(5):e1000379
pubmed: 19424506
Nature. 2008 Aug 21;454(7207):995-9
pubmed: 18650810
Neural Comput. 2011 Dec;23(12):3016-69
pubmed: 21919785
J Neurosci. 1989 Oct;9(10):3463-81
pubmed: 2795134
Nat Neurosci. 2008 Nov;11(11):1335-42
pubmed: 18931665
Elife. 2020 Sep 17;9:
pubmed: 32940606
Curr Biol. 2014 Sep 8;24(17):2033-40
pubmed: 25155504
Neuron. 2014 Aug 6;83(3):663-78
pubmed: 25102561
Nat Neurosci. 2003 Apr;6(4):391-8
pubmed: 12652303
Nat Rev Neurosci. 2019 Jul;20(7):397-424
pubmed: 30948838
Cell. 2018 Oct 4;175(2):472-487.e20
pubmed: 30146164
J Neurosci. 2008 Oct 22;28(43):10905-17
pubmed: 18945898
Nat Rev Neurosci. 2006 Feb;7(2):153-60
pubmed: 16429124
Ann N Y Acad Sci. 2004 Jun;1018:46-57
pubmed: 15240351
Phys Rev Lett. 2012 Jun 1;108(22):228102
pubmed: 23003656
Neuron. 2013 Aug 7;79(3):516-29
pubmed: 23931999
J Neurophysiol. 2006 Aug;96(2):872-90
pubmed: 16624998
J Neurosci. 2008 Apr 23;28(17):4528-32
pubmed: 18434531
Cell. 2020 Dec 10;183(6):1600-1616.e25
pubmed: 33248024
Cell Rep. 2014 Aug 21;8(4):1105-18
pubmed: 25108805
Neuropharmacology. 2011 Sep;61(3):524-43
pubmed: 21530552
Science. 1997 Mar 14;275(5306):1593-9
pubmed: 9054347
Neurobiol Learn Mem. 2016 Nov;135:40-49
pubmed: 27544850
Focus (Am Psychiatr Publ). 2018 Oct;16(4):420-429
pubmed: 32021580
Brain Cogn. 2009 Dec;71(3):427-36
pubmed: 19423206
J Neurosci. 2017 Sep 13;37(37):8863-8875
pubmed: 28821671
Network. 2000 May;11(2):119-29
pubmed: 10880002
Brain Struct Funct. 2016 Jan;221(1):535-61
pubmed: 25403254
Science. 2009 Oct 16;326(5951):449-53
pubmed: 19833972
Behav Brain Sci. 2001 Aug;24(4):602-7; discussion 652-71
pubmed: 12048943
Proc Natl Acad Sci U S A. 2013 May 14;110(20):8248-53
pubmed: 23630284
Neurosci Biobehav Rev. 2005;29(4-5):829-41
pubmed: 15893820
Neuron. 2014 Aug 6;83(3):645-62
pubmed: 25102560
Elife. 2015 Apr 08;4:
pubmed: 25853523
Neuron. 2014 Dec 3;84(5):1034-48
pubmed: 25467985
Neural Netw. 2002 Jun-Jul;15(4-6):603-16
pubmed: 12371515

Auteurs

Emerson F Harkin (EF)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

Michael B Lynn (MB)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

Alexandre Payeur (A)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.
Department of Physics, University of Ottawa, Ottawa, Canada.

Jean-François Boucher (JF)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

Léa Caya-Bissonnette (L)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

Dominic Cyr (D)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

Chloe Stewart (C)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

André Longtin (A)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.
Department of Physics, University of Ottawa, Ottawa, Canada.

Richard Naud (R)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.
Department of Physics, University of Ottawa, Ottawa, Canada.

Jean-Claude Béïque (JC)

Brain and Mind Research Institute, Centre for Neural Dynamics, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Canada.

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