A Diverged Transcriptional Network for Usage of Two Fe-S Cluster Biogenesis Machineries in the Delta-Proteobacterium Myxococcus xanthus.

Escherichia coli Proteins / metabolism Myxococcus xanthus / genetics Gene Regulatory Networks Escherichia coli / genetics Iron / metabolism Sulfur / metabolism Iron-Sulfur Proteins / chemistry
Fe-S cluster biogenesis Fe-S cluster homeostasis Myxococcus xanthus Rrf2-type regulator iron starvation oxidative stress transcription regulation

Journal

mBio
ISSN: 2150-7511
Titre abrégé: mBio
Pays: United States
ID NLM: 101519231

Informations de publication

Date de publication:
28 02 2023
Historique:
pubmed: 20 1 2023
medline: 3 3 2023
entrez: 19 1 2023
Statut: ppublish

Résumé

Myxococcus xanthus possesses two Fe-S cluster biogenesis machineries, ISC (iron-sulfur cluster) and SUF (sulfur mobilization). Here, we show that in comparison to the phylogenetically distant Enterobacteria, which also have both machineries, M. xanthus evolved an independent transcriptional scheme to coordinately regulate the expression of these machineries. This transcriptional response is directed by RisR, which we show to belong to a phylogenetically distant and biochemically distinct subgroup of the Rrf2 transcription factor family, in comparison to IscR that regulates the

Identifiants

DOI: 10.1128/mbio.03001-22 PMID: 36656032 PMC: PMC9973013
pubmed: 36656032
doi: 10.1128/mbio.03001-22
pmc: PMC9973013
doi:

Substances chimiques

Escherichia coli Proteins 0
Iron E1UOL152H7
Sulfur 70FD1KFU70
Iron-Sulfur Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0300122

Références

J Bacteriol. 2008 Dec;190(24):8244-7
pubmed: 18849427
Proc Natl Acad Sci U S A. 2014 Jun 3;111(22):E2251-60
pubmed: 24847070
Proc Natl Acad Sci U S A. 2001 Dec 18;98(26):14895-900
pubmed: 11742080
Science. 1985 Oct 4;230(4721):18-24
pubmed: 3929384
Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3378-82
pubmed: 8475084
Nucleic Acids Res. 2021 Jul 2;49(W1):W293-W296
pubmed: 33885785
Res Microbiol. 2012 Nov-Dec;163(9-10):579-91
pubmed: 23123306
Biochemistry. 2014 Dec 23;53(50):7867-9
pubmed: 25485887
J Biol Chem. 2007 Nov 2;282(44):31909-19
pubmed: 17827500
Adv Microb Physiol. 2020;76:1-39
pubmed: 32408945
J Am Chem Soc. 2019 Feb 13;141(6):2367-2375
pubmed: 30657661
J Bacteriol. 2012 Apr;194(7):1679-88
pubmed: 22287527
FEBS J. 2011 Aug;278(15):2689-701
pubmed: 21624051
EMBO J. 2003 Feb 3;22(3):427-37
pubmed: 12554644
Mol Microbiol. 2004 May;52(3):861-72
pubmed: 15101990
J Biol Chem. 2017 Aug 4;292(31):12754-12763
pubmed: 28615445
PLoS Pathog. 2014 Jun 12;10(6):e1004194
pubmed: 24945271
Mol Biol Evol. 2013 Apr;30(4):772-80
pubmed: 23329690
Metallomics. 2022 May 25;14(5):
pubmed: 35349713
EMBO J. 2009 Jun 3;28(11):1551-61
pubmed: 19407815
Microb Physiol. 2021;31(2):57-66
pubmed: 33794538
Mol Microbiol. 2004 Mar;51(6):1745-55
pubmed: 15009899
BMC Evol Biol. 2010 Jul 13;10:210
pubmed: 20626897
Res Microbiol. 2019 Nov - Dec;170(8):426-434
pubmed: 31419582
PLoS One. 2014 Dec 31;9(12):e115318
pubmed: 25551825
Biotechnol Adv. 2020 Mar - Apr;39:107480
pubmed: 31707075
Methods Enzymol. 1980;65(1):499-560
pubmed: 6246368
J Bacteriol. 2014 Dec;196(24):4315-23
pubmed: 25266384
Annu Rev Microbiol. 2015;69:93-108
pubmed: 26070785
Commun Biol. 2022 Jul 30;5(1):769
pubmed: 35908109
J Biol Inorg Chem. 2000 Feb;5(1):2-15
pubmed: 10766431
J Bacteriol. 2020 Jan 15;202(3):
pubmed: 31712282
Nat Struct Mol Biol. 2013 Jun;20(6):740-7
pubmed: 23644595
Biochim Biophys Acta. 2013 Mar;1827(3):455-69
pubmed: 23298813
Cell Microbiol. 2017 Apr;19(4):
pubmed: 27704705
Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6640-5
pubmed: 10829079
ISME J. 2020 May;14(5):1111-1124
pubmed: 31992858
Microbiol Mol Biol Rev. 2008 Mar;72(1):110-25, table of contents
pubmed: 18322036
Nat Rev Microbiol. 2010 Jun;8(6):436-46
pubmed: 20467446
J Bacteriol. 2005 Feb;187(3):1135-60
pubmed: 15659690
PLoS One. 2018 Jul 6;13(7):e0200145
pubmed: 29979728
J Bacteriol. 2009 Apr;191(7):2083-90
pubmed: 19168612
Elife. 2019 Oct 14;8:
pubmed: 31609203
PLoS Comput Biol. 2011 Oct;7(10):e1002195
pubmed: 22039361
Annu Rev Microbiol. 2004;58:75-98
pubmed: 15487930
Mol Microbiol. 2013 Feb;87(3):493-508
pubmed: 23320508
Front Microbiol. 2016 May 26;7:781
pubmed: 27303375
Nat Rev Microbiol. 2017 Jun;15(6):338-350
pubmed: 28344348
Front Microbiol. 2022 Sep 26;13:1004476
pubmed: 36225384
J Biol Chem. 2022 Jul;298(7):102046
pubmed: 35597283
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
Mol Microbiol. 2006 Jul;61(1):206-18
pubmed: 16824106
PLoS Comput Biol. 2006 Dec 15;2(12):e163
pubmed: 17173478
Curr Opin Microbiol. 2003 Apr;6(2):181-5
pubmed: 12732309
Mol Biosyst. 2009 Jun;5(6):567-74
pubmed: 19462013
Mol Microbiol. 2013 Feb;87(3):478-92
pubmed: 23075318
Nat Chem Biol. 2006 Apr;2(4):171-4
pubmed: 16547473
FEBS Lett. 2012 Nov 16;586(22):4016-22
pubmed: 23068614
Mol Microbiol. 2008 Mar;67(6):1257-73
pubmed: 18284573
Nucleic Acids Res. 1997 Sep 1;25(17):3389-402
pubmed: 9254694
Nat Commun. 2017 Apr 20;8:15052
pubmed: 28425466
Biochim Biophys Acta. 2015 Jun;1853(6):1464-9
pubmed: 25447545
Cold Spring Harb Perspect Biol. 2010 Aug;2(8):a000380
pubmed: 20610548
Science. 2013 Jun 28;340(6140):1583-7
pubmed: 23812717
Biochemistry. 2012 Jun 5;51(22):4453-62
pubmed: 22583201
Proc Natl Acad Sci U S A. 2000 Aug 1;97(16):9098-103
pubmed: 10922065
Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):12261-12266
pubmed: 29087312
Chembiochem. 2006 Aug;7(8):1206-20
pubmed: 16835859
Nat Ecol Evol. 2022 Oct;6(10):1564-1572
pubmed: 36109654
Mol Microbiol. 2006 Feb;59(4):1073-82
pubmed: 16430685
Bioinformatics. 2019 Jan 15;35(2):329-331
pubmed: 29912383
Annu Rev Microbiol. 2009;63:599-623
pubmed: 19575567
Annu Rev Microbiol. 2015;69:505-26
pubmed: 26488283
Mol Microbiol. 2006 May;60(4):1058-75
pubmed: 16677314
Redox Biol. 2021 Oct;46:102062
pubmed: 34392160
Mol Microbiol. 2010 Dec;78(6):1448-67
pubmed: 21143317
Annu Rev Biochem. 2016 Jun 2;85:485-514
pubmed: 27145839

Auteurs

Mathieu Sourice (M)

Laboratoire de Chimie Bactérienne (UMR7283), Institut de Microbiologie de la Méditerranée, Institut Microbiologie Bioénergies et Biotechnologie, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille, France.

Isabel Askenasy (I)

Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.

Pierre Simon Garcia (PS)

Department of Microbiology, Unit Stress Adaptation and Metabolism in Enterobacteria, Institut Pasteur, Université Paris Cité, Paris, France.
Department of Microbiology, Unit Evolutionary Biology of the Microbial Cell, Institut Pasteur, Université Paris Cité, Paris, France.

Yann Denis (Y)

Plate-forme Transcriptomique, Institut de Microbiologie de la Méditerranée (FR3479), Marseille, France.

Gaël Brasseur (G)

Laboratoire de Chimie Bactérienne (UMR7283), Institut de Microbiologie de la Méditerranée, Institut Microbiologie Bioénergies et Biotechnologie, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille, France.

Patricia J Kiley (PJ)

Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
ORCID: 0000-0002-8771-1782

Béatrice Py (B)

Laboratoire de Chimie Bactérienne (UMR7283), Institut de Microbiologie de la Méditerranée, Institut Microbiologie Bioénergies et Biotechnologie, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille, France.

Corinne Aubert (C)

Laboratoire de Chimie Bactérienne (UMR7283), Institut de Microbiologie de la Méditerranée, Institut Microbiologie Bioénergies et Biotechnologie, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille, France.

Articles similaires

Exploring transcriptomic mechanisms underlying pulmonary adaptation to diverse environments in Indian rams.

Ritika Gera, Reena Arora, Pooja Chhabra et al.
1.00
Animals Lung India Sheep Transcriptome

Bioinspired gelated cell sheet-supported lactobacillus biofilm for aerobic vaginitis diagnosis and treatment.

Yueyue Gui, Qingfei Sun, Kexin Li et al.
1.00
Female Biofilms Animals Lactobacillus Mice

Magnitude and factors associated with iron supplementation among pregnant women in anemia hot spot regions of Ethiopia: Multilevel analysis based on Bayesian approach.

Yilkal Negesse, Habtamu Temesgen, Wubetu Woyraw et al.
1.00
Humans Female Ethiopia Pregnancy Adult

Transcriptome-wide splicing network reveals specialized regulatory functions of the core spliceosome.

Malgorzata E Rogalska, Estefania Mancini, Sophie Bonnal et al.
1.00
Spliceosomes Humans Transcriptome Alternative Splicing RNA Splice Sites

Classifications MeSH

questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines bactériennes › Protéines Escherichia coli › A Diverged Transcriptional Network for Usage...
questionsmedicales.fr › Bactéries › Proteobacteria › Deltaproteobacteria › Myxococcales › Myxococcus › Myxococcus xanthus › A Diverged Transcriptional Network for Usage...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Séquences d'acides nucléiques régulatrices › Réseaux de régulation génique › A Diverged Transcriptional Network for Usage...
questionsmedicales.fr › Bactéries › Proteobacteria › Gammaproteobacteria › Enterobacteriaceae › Escherichia › Escherichia coli › A Diverged Transcriptional Network for Usage...
questionsmedicales.fr › Produits chimiques inorganiques › Métaux › Métaux lourds › Fer › A Diverged Transcriptional Network for Usage...
questionsmedicales.fr › Produits chimiques inorganiques › Éléments › Chalcogènes › Soufre › A Diverged Transcriptional Network for Usage...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Métalloprotéines › Protéines de liaison au fer › Protéines à fer non hème › Ferrosulfoprotéines › A Diverged Transcriptional Network for Usage...