IVT generation of guideRNAs for Cas9-enrichment Nanopore Sequencing.


Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
07 Feb 2023
Historique:
pubmed: 18 2 2023
medline: 18 2 2023
entrez: 17 2 2023
Statut: epublish

Résumé

Generating high-coverage sequencing coverage at select genomic loci has extensive applications in both research science and genetic medicine. Long-read sequencing technologies (e.g. nanopore sequencing) have expanded our ability to generate sequencing data in regions (e.g. repetitive elements) that are difficult to interrogate with short-read sequencing methods. In work presented here, we expand on our previous work using CRISPR/Cas9 for targeted nanopore sequencing by using

Identifiants

pubmed: 36798399
doi: 10.1101/2023.02.07.527484
pmc: PMC9934585
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NIGMS NIH HHS
ID : T32 GM136577
Pays : United States

Auteurs

Timothy Gilpatrick (T)

Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.

Josh Zhiyong Wang (JZ)

Agilent Technologies, Santa Clara, California, USA.

David Weiss (D)

Agilent Technologies, Santa Clara, California, USA.

Alexis L Norris (AL)

Departments of Pathology and Oncology, The Sol Goldman Pancreatic Cancer Research Center, Johns Hopkins School of Medicine, Baltimore, MD, USA.

James Eshleman (J)

Departments of Pathology and Oncology, The Sol Goldman Pancreatic Cancer Research Center, Johns Hopkins School of Medicine, Baltimore, MD, USA.

Winston Timp (W)

Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Department of Molecular Biology and Genetics, Department of Medicine, Division of Infectious Disease, Johns Hopkins School of Medicine, Baltimore, MD, USA.

Classifications MeSH