Timothy Gilpatrick

Affiliations

Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.

Publications (7)

Author Correction: Nanopore native RNA sequencing of a human poly(A) transcriptome.

Nature methods

Avec: Rachael E Workman , Alison D Tang , Paul S Tang , Miten Jain , John R Tyson , Roham Razaghi , Philip C Zuzarte , Timothy Gilpatrick , Alexander Payne , Joshua Quick , Norah Sadowski , Nadine Holmes , Jaqueline Goes de Jesus , Karen L Jones , Cameron M Soulette , Terrance P Snutch , Nicholas Loman , Benedict Paten , Matthew Loose , Jared T Simpson , Hugh E Olsen , Angela N Brooks , Mark Akeson , Winston Timp

Characterization of human telomerase reverse transcriptase promoter methylation and transcription factor binding in differentiated thyroid cancer cell lines.

Genes, chromosomes & cancer

Avec: Brittany A Avin , Yongchun Wang , Timothy Gilpatrick , Rachael E Workman , Isac Lee , Winston Timp , Christopher B Umbricht , Martha A Zeiger

Nanopore native RNA sequencing of a human poly(A) transcriptome.

Nature methods

Avec: Rachael E Workman , Alison D Tang , Paul S Tang , Miten Jain , John R Tyson , Roham Razaghi , Philip C Zuzarte , Timothy Gilpatrick , Alexander Payne , Joshua Quick , Norah Sadowski , Nadine Holmes , Jaqueline Goes de Jesus , Karen L Jones , Cameron M Soulette , Terrance P Snutch , Nicholas Loman , Benedict Paten , Matthew Loose , Jared T Simpson , Hugh E Olsen , Angela N Brooks , Mark Akeson , Winston Timp

Targeted nanopore sequencing with Cas9-guided adapter ligation.

Nature biotechnology

Avec: Timothy Gilpatrick , Isac Lee , James E Graham , Etienne Raimondeau , Rebecca Bowen , Andrew Heron , Bradley Downs , Saraswati Sukumar , Fritz J Sedlazeck , Winston Timp

IVT generation of guideRNAs for Cas9-enrichment Nanopore Sequencing.

bioRxiv : the preprint server for biology

Avec: Timothy Gilpatrick , Josh Zhiyong Wang , David Weiss , Alexis L Norris , James Eshleman , Winston Timp

Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing.

Nature methods

Avec: Isac Lee , Roham Razaghi , Timothy Gilpatrick , Michael Molnar , Ariel Gershman , Norah Sadowski , Fritz J Sedlazeck , Kasper D Hansen , Jared T Simpson , Winston Timp

Long read mitochondrial genome sequencing using Cas9-guided adaptor ligation.

Mitochondrion

Avec: Amy R Vandiver , Brittany Pielstick , Timothy Gilpatrick , Austin N Hoang , Hillary J Vernon , Jonathan Wanagat , Winston Timp

Réseau de co-auteurs

Winston Timp 7 collaborations

Rachael E Workman 3 collaborations

Roham Razaghi 3 collaborations

Norah Sadowski 3 collaborations

Jared T Simpson 3 collaborations

Isac Lee 3 collaborations

Alison D Tang 2 collaborations

Paul S Tang 2 collaborations

Miten Jain 2 collaborations

John R Tyson 2 collaborations

Philip C Zuzarte 2 collaborations

Alexander Payne 2 collaborations

Joshua Quick 2 collaborations

Nadine Holmes 2 collaborations

Jaqueline Goes de Jesus 2 collaborations

Karen L Jones 2 collaborations

Cameron M Soulette 2 collaborations

Terrance P Snutch 2 collaborations

Nicholas Loman 2 collaborations

Benedict Paten 2 collaborations

Matthew Loose 2 collaborations

Hugh E Olsen 2 collaborations

Angela N Brooks 2 collaborations

Mark Akeson 2 collaborations

Fritz J Sedlazeck 2 collaborations

Brittany A Avin 1 collaboration

Yongchun Wang 1 collaboration

Christopher B Umbricht 1 collaboration

Martha A Zeiger 1 collaboration

James E Graham 1 collaboration

Etienne Raimondeau 1 collaboration

Rebecca Bowen 1 collaboration

Andrew Heron 1 collaboration

Bradley Downs 1 collaboration

Saraswati Sukumar 1 collaboration

Josh Zhiyong Wang 1 collaboration

David Weiss 1 collaboration

Alexis L Norris 1 collaboration

James Eshleman 1 collaboration

Michael Molnar 1 collaboration

Ariel Gershman 1 collaboration

Kasper D Hansen 1 collaboration

Amy R Vandiver 1 collaboration

Brittany Pielstick 1 collaboration

Austin N Hoang 1 collaboration

Hillary J Vernon 1 collaboration

Jonathan Wanagat 1 collaboration