Fluoroquinolone-resistance mechanisms and molecular epidemiology of ciprofloxacin-resistant Klebsiella pneumoniae isolates in Iran.
Humans
Ciprofloxacin
/ pharmacology
Fluoroquinolones
/ pharmacology
Klebsiella pneumoniae
/ genetics
Anti-Bacterial Agents
/ pharmacology
Molecular Epidemiology
Multilocus Sequence Typing
Iran
/ epidemiology
DNA Gyrase
/ genetics
Plasmids
Microbial Sensitivity Tests
Drug Resistance, Bacterial
/ genetics
GyrA
Klebsiella pneumoniae
MLST
ParC
Plasmid mediated quinolone resistance genes
Journal
Folia microbiologica
ISSN: 1874-9356
Titre abrégé: Folia Microbiol (Praha)
Pays: United States
ID NLM: 0376757
Informations de publication
Date de publication:
Aug 2023
Aug 2023
Historique:
received:
15
08
2022
accepted:
15
02
2023
medline:
7
7
2023
pubmed:
5
3
2023
entrez:
4
3
2023
Statut:
ppublish
Résumé
Klebsiella pneumoniae is an important cause of nosocomial infections and displays increasing resistance to fluoroquinolones (FQ). This study surveyed the mechanisms of FQ resistance and molecular typing of K. pneumoniae isolates from intensive care units patients in Tehran, Iran. A total of 48 ciprofloxacin (CIP) resistant K. pneumoniae isolates from urine samples were included in this study. Broth microdilution assays revealed high-level CIP resistance (MIC > 32 μg/mL) in 31.25% of the isolates. Plasmid-mediated quinolone resistance genes were detected in 41 (85.4%) isolates. Among which, qnrS (41.67%) was the most prevalent followed by qnrD (35.42%), qnrB (27.1%), qnrA (25%), qepA (22.9%), aac(6')-Ib-cr (20.83%), and qnrC (6.25%). Target site mutations (gyrA and parC) were assessed using PCR and sequencing on all isolates. A single mutation in gyrA (S83I) was found in 13 (27.1%) isolates and two isolates harbored six simultaneous mutations. Fourteen isolates (29.2%) had mutations in parC and S129A and A141V mutations were the most prevalent. Real time PCR showed an increase in the expression level of acrB and oqxB efflux genes in 68.75 and 29.16% isolates, respectively. Enterobacterial repetitive intergenic consensus (ERIC)-PCR revealed 14 genotypes and 11 of them were classified by multilocus sequence typing (MLST) into 11 different sequence types belonging to seven clonal complexes and two singletons, most of them have not been reported in Iran yet. We are concerned about the spread of these clones throughout our country. Most FQ resistance mechanisms were detected among our isolates. However, target site mutation had the greatest effect on CIP resistance among our isolates.
Identifiants
pubmed: 36870040
doi: 10.1007/s12223-023-01042-2
pii: 10.1007/s12223-023-01042-2
doi:
Substances chimiques
Ciprofloxacin
5E8K9I0O4U
Fluoroquinolones
0
Anti-Bacterial Agents
0
DNA Gyrase
EC 5.99.1.3
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
633-644Informations de copyright
© 2023. Institute of Microbiology, Academy of Sciences of the Czech Republic, v.v.i.
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