Classifying Firearm Injury Intent in Electronic Hospital Records Using Natural Language Processing.


Journal

JAMA network open
ISSN: 2574-3805
Titre abrégé: JAMA Netw Open
Pays: United States
ID NLM: 101729235

Informations de publication

Date de publication:
03 04 2023
Historique:
medline: 10 4 2023
entrez: 6 4 2023
pubmed: 7 4 2023
Statut: epublish

Résumé

International Classification of Diseases-coded hospital discharge data do not accurately reflect whether firearm injuries were caused by assault, unintentional injury, self-harm, legal intervention, or were of undetermined intent. Applying natural language processing (NLP) and machine learning (ML) techniques to electronic health record (EHR) narrative text could be associated with improved accuracy of firearm injury intent data. To assess the accuracy with which an ML model identified firearm injury intent. A cross-sectional retrospective EHR review was conducted at 3 level I trauma centers, 2 from health care institutions in Boston, Massachusetts, and 1 from Seattle, Washington, between January 1, 2000, and December 31, 2019; data analysis was performed from January 18, 2021, to August 22, 2022. A total of 1915 incident cases of firearm injury in patients presenting to emergency departments at the model development institution and 769 from the external validation institution with a firearm injury code assigned according to International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9-CM) or International Statistical Classification of Diseases and Related Health Problems, 10th Revision, Clinical Modification (ICD-10-CM), in discharge data were included. Classification of firearm injury intent. Intent classification accuracy by the NLP model was compared with ICD codes assigned by medical record coders in discharge data. The NLP model extracted intent-relevant features from narrative text that were then used by a gradient-boosting classifier to determine the intent of each firearm injury. Classification accuracy was evaluated against intent assigned by the research team. The model was further validated using an external data set. The NLP model was evaluated in 381 patients presenting with firearm injury at the model development site (mean [SD] age, 39.2 [13.0] years; 348 [91.3%] men) and 304 patients at the external development site (mean [SD] age, 31.8 [14.8] years; 263 [86.5%] men). The model proved more accurate than medical record coders in assigning intent to firearm injuries at the model development site (accident F-score, 0.78 vs 0.40; assault F-score, 0.90 vs 0.78). The model maintained this improvement on an external validation set from a second institution (accident F-score, 0.64 vs 0.58; assault F-score, 0.88 vs 0.81). While the model showed some degradation between institutions, retraining the model using data from the second institution further improved performance on that site's records (accident F-score, 0.75; assault F-score, 0.92). The findings of this study suggest that NLP ML can be used to improve the accuracy of firearm injury intent classification compared with ICD-coded discharge data, particularly for cases of accident and assault intents (the most prevalent and commonly misclassified intent types). Future research could refine this model using larger and more diverse data sets.

Identifiants

pubmed: 37022685
pii: 2803252
doi: 10.1001/jamanetworkopen.2023.5870
pmc: PMC10080369
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e235870

Commentaires et corrections

Type : CommentIn

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Auteurs

Erin MacPhaul (E)

Department of Emergency Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.

Li Zhou (L)

Department of Emergency Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.

Stephen J Mooney (SJ)

Firearm Injury & Policy Research Program, University of Washington, Seattle.
Department of Epidemiology, School of Public Health, University of Washington, Seattle.

Deborah Azrael (D)

Harvard Injury Control Research Center, Harvard T. H. Chan School of Public Health, Boston, Massachusetts.

Andrew Bowen (A)

Firearm Injury & Policy Research Program, University of Washington, Seattle.

Ali Rowhani-Rahbar (A)

Firearm Injury & Policy Research Program, University of Washington, Seattle.
Department of Epidemiology, School of Public Health, University of Washington, Seattle.

Ravali Yenduri (R)

Department of Emergency Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
Center for Surgery and Public Health, Brigham and Women's Hospital, Boston, Massachusetts.

Catherine Barber (C)

Harvard Injury Control Research Center, Harvard T. H. Chan School of Public Health, Boston, Massachusetts.

Eric Goralnick (E)

Department of Emergency Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
Center for Surgery and Public Health, Brigham and Women's Hospital, Boston, Massachusetts.

Matthew Miller (M)

Harvard Injury Control Research Center, Harvard T. H. Chan School of Public Health, Boston, Massachusetts.
Department of Health Sciences, Bouve College of Health Sciences, Northeastern University, Boston, Massachusetts.

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