Novel method to recover Salmonella enterica cells for Tn-Seq approaches from lettuce leaves and agricultural environments using combination of sonication, filtration, and dialysis membrane.


Journal

Journal of microbiological methods
ISSN: 1872-8359
Titre abrégé: J Microbiol Methods
Pays: Netherlands
ID NLM: 8306883

Informations de publication

Date de publication:
05 2023
Historique:
received: 18 11 2022
revised: 05 04 2023
accepted: 08 04 2023
medline: 19 5 2023
pubmed: 14 4 2023
entrez: 13 4 2023
Statut: ppublish

Résumé

Salmonella enterica in agricultural environments has become an important concern, due to its potential transmission to humans and the associated public health risks. To identify genes contributing to Salmonella adaptation to such environments, transposon sequencing has been used in recent years. However, isolating Salmonella from atypical hosts, such as plant leaves, can pose technical challenges due to low bacterial content and the difficulty to separate an adequate number of bacteria from host tissues. In this study, we describe a modified methodology using a combination of sonication and filtration to recover S. enterica cells from lettuce leaves. We successfully recovered over a total of 3.5 × 10

Identifiants

pubmed: 37054820
pii: S0167-7012(23)00058-1
doi: 10.1016/j.mimet.2023.106724
pii:
doi:

Substances chimiques

Soil 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

106724

Informations de copyright

Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.

Auteurs

Min Han (M)

Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Institute for Epidemiology and Pathogen Diagnostics, Messeweg 11/12, Braunschweig 38104, Germany.

Jasper Schierstaedt (J)

Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Institute for Epidemiology and Pathogen Diagnostics, Messeweg 11/12, Braunschweig 38104, Germany; Leibniz Institute of Vegetable and Ornamental Crops (IGZ), Department Plant-Microbe Systems, Theodor-Echtermeyer Weg 1, Großbeeren 14979, Germany.

Yongming Duan (Y)

Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Institute for Epidemiology and Pathogen Diagnostics, Messeweg 11/12, Braunschweig 38104, Germany.

Jérôme Trotereau (J)

INRAE Val de Loire, Université de Tours, UMR ISP, Nouzilly 37380, France.

Isabelle Virlogeux-Payant (I)

INRAE Val de Loire, Université de Tours, UMR ISP, Nouzilly 37380, France.

Adam Schikora (A)

Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Institute for Epidemiology and Pathogen Diagnostics, Messeweg 11/12, Braunschweig 38104, Germany. Electronic address: adam.schikora@julius-kuehn.de.

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