Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023.


Journal

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin
ISSN: 1560-7917
Titre abrégé: Euro Surveill
Pays: Sweden
ID NLM: 100887452

Informations de publication

Date de publication:
04 2023
Historique:
medline: 24 4 2023
pubmed: 20 4 2023
entrez: 20 04 2023
Statut: ppublish

Résumé

In late 2022 and early 2023, SARS-CoV-2 infections were detected on three mink farms in Poland situated within a few km from each other. Whole-genome sequencing of the viruses on two of the farms showed that they were related to a virus identified in humans in the same region 2 years before (B.1.1.307 lineage). Many mutations were found, including in the S protein typical of adaptations to the mink host. The origin of the virus remains to be determined.

Identifiants

pubmed: 37078885
doi: 10.2807/1560-7917.ES.2023.28.16.2300188
pmc: PMC10283451
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Références

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3 Biotech. 2023 Jan;13(1):5
pubmed: 36514483
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pubmed: 35135441

Auteurs

Katarzyna Domańska-Blicharz (K)

Department of Poultry Diseases, National Veterinary Research Institute, Puławy, Poland.

Bas B Oude Munnink (BB)

Department of Viroscience, Erasmus University Medical Centre, Rotterdam, the Netherlands.

Anna Orłowska (A)

Department of Virology, National Veterinary Research Institute, Puławy, Poland.

Marcin Smreczak (M)

Department of Virology, National Veterinary Research Institute, Puławy, Poland.

Justyna Opolska (J)

Department of Poultry Diseases, National Veterinary Research Institute, Puławy, Poland.

Anna Lisowska (A)

Department of Poultry Diseases, National Veterinary Research Institute, Puławy, Poland.

Paweł Trębas (P)

Department of Virology, National Veterinary Research Institute, Puławy, Poland.

Wojciech Socha (W)

Department of Virology, National Veterinary Research Institute, Puławy, Poland.

Aleksandra Giza (A)

Department of Omics Analyses, National Veterinary Research Institute, Puławy, Poland.

Arkadiusz Bomba (A)

Department of Omics Analyses, National Veterinary Research Institute, Puławy, Poland.

Ewelina Iwan (E)

Department of Omics Analyses, National Veterinary Research Institute, Puławy, Poland.

Jerzy Rola (J)

Department of Virology, National Veterinary Research Institute, Puławy, Poland.

Marion Koopmans (M)

Department of Viroscience, Erasmus University Medical Centre, Rotterdam, the Netherlands.

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Classifications MeSH