A nonsense variant in the N-terminal acetyltransferase NAA30 may be associated with global developmental delay and tracheal cleft.


Journal

American journal of medical genetics. Part A
ISSN: 1552-4833
Titre abrégé: Am J Med Genet A
Pays: United States
ID NLM: 101235741

Informations de publication

Date de publication:
09 2023
Historique:
revised: 03 06 2023
received: 02 04 2023
accepted: 13 06 2023
medline: 21 8 2023
pubmed: 30 6 2023
entrez: 30 6 2023
Statut: ppublish

Résumé

Most human proteins are N-terminally acetylated by N-terminal acetyltransferases (NATs), which play crucial roles in many cellular functions. The NatC complex, comprising the catalytic subunit NAA30 and the auxiliary subunits NAA35 and NAA38, is estimated to acetylate up to 20% of the human proteome in a co-translational manner. Several NAT enzymes have been linked to rare genetic diseases, causing developmental delay, intellectual disability, and heart disease. Here, we report a de novo heterozygous NAA30 nonsense variant c.244C>T (p.Q82*) (NM_001011713.2), which was identified by whole exome sequencing in a 5-year-old boy presenting with global development delay, autism spectrum disorder, hypotonia, tracheal cleft, and recurrent respiratory infections. Biochemical studies were performed to assess the functional impact of the premature stop codon on NAA30's catalytic activity. We find that NAA30-Q82* completely disrupts the N-terminal acetyltransferase activity toward a classical NatC substrate using an in vitro acetylation assay. This finding corresponds with structural modeling showing that the truncated NAA30 variant lacks the entire GNAT domain, which is required for catalytic activity. This study suggests that defective NatC-mediated N-terminal acetylation can cause disease, thus expanding the spectrum of NAT variants linked to genetic disease.

Identifiants

pubmed: 37387332
doi: 10.1002/ajmg.a.63338
doi:

Substances chimiques

N-Terminal Acetyltransferases EC 2.3.1.88
NAA30 protein, human EC 2.3.1.256
N-Terminal Acetyltransferase C EC 2.3.1.256

Types de publication

Case Reports Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2402-2410

Informations de copyright

© 2023 The Authors. American Journal of Medical Genetics Part A published by Wiley Periodicals LLC.

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Auteurs

Sylvia Varland (S)

Department of Biomedicine, University of Bergen, Bergen, Norway.
Department of Surgery, Haukeland University Hospital, Bergen, Norway.

Kirsten Marie Brønstad (KM)

Department of Biomedicine, University of Bergen, Bergen, Norway.

Stephanie J Skinner (SJ)

Department of Pediatrics, College of Medicine, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.

Thomas Arnesen (T)

Department of Biomedicine, University of Bergen, Bergen, Norway.
Department of Surgery, Haukeland University Hospital, Bergen, Norway.

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