QTL mapping of human retina DNA methylation identifies 87 gene-epigenome interactions in age-related macular degeneration.

GWAS aging eQTL eQTM epigenome gene expression mQTL neurodegeneration retina

Journal

Research square
Titre abrégé: Res Sq
Pays: United States
ID NLM: 101768035

Informations de publication

Date de publication:
16 Jun 2023
Historique:
pubmed: 3 7 2023
medline: 3 7 2023
entrez: 3 7 2023
Statut: epublish

Résumé

DNA methylation (DNAm) provides a crucial epigenetic mark linking genetic variations to environmental influence. We analyzed array-based DNAm profiles of 160 human retinas with co-measured RNA-seq and > 8 million genetic variants, uncovering sites of genetic regulation in

Identifiants

pubmed: 37398472
doi: 10.21203/rs.3.rs-3011096/v1
pmc: PMC10312909
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NEI NIH HHS
ID : P30 EY014104
Pays : United States
Organisme : NEI NIH HHS
ID : R01 EY031424
Pays : United States
Organisme : Intramural NIH HHS
ID : ZIA EY000450
Pays : United States
Organisme : Intramural NIH HHS
ID : ZIA EY000546
Pays : United States

Commentaires et corrections

Type : UpdateIn

Déclaration de conflit d'intérêts

Declaration of interests The authors declare no competing interests.

Auteurs

Jayshree Advani (J)

National Eye Institute, National Institutes of Health.

Ximena Corso-Diaz (X)

National Eye Institute.

Madeline Kwicklis (M)

National Eye Institute, National Institutes of Health.

Freekje van Asten (F)

National Eye Institute, National Institutes of Health.

Rinki Ratnapriya (R)

National Eye Institute, National Institutes of Health.

Puja Mehta (P)

Department of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA, USA.

Andrew Hamel (A)

Department of Ophthalmology, Massachusetts Eye and Ear.

Sudeep Mahrotra (S)

Mass Eye and Ear, Harvard Med Sch.

Ayellet Segrè (A)

Massachusetts Eye and Ear.

Christina Kiel (C)

University of Regensburg.

Tobias Strunz (T)

University of Regensburg.

Emily Chew (E)

National Eye Institute/National Institutes of Health.

Dena Hernandez (D)

National Institutes of Health.

Sandra Montezuma (S)

University of Minnesota.

Deborah Ferrington (D)

University of Minnesota.

Anand Swaroop (A)

National Eye Institute, National Institutes of Health.

Classifications MeSH