Anand Swaroop

Affiliations

Neurobiology-Neurodegeneration & Repair Laboratory, National Eye Institute, National Institutes of Health, MSC0610, 6 Center Drive, Bethesda, MD 20892 USA. Electronic address: swaroopa@nei.nih.gov.

Publications (34)

Genetics and therapy for pediatric eye diseases.

EBioMedicine

Avec: Holly Y Chen , Ordan J Lehmann , Anand Swaroop

Improved Retinal Organoid Differentiation by Modulating Signaling Pathways Revealed by Comparative Transcriptome Analyses with Development In Vivo.

Stem cell reports

Avec: Matthew J Brooks , Holly Y Chen , Ryan A Kelley , Anupam K Mondal , Kunio Nagashima , Natalia De Val , Tiansen Li , Vijender Chaitankar , Anand Swaroop

Transcriptome-based molecular staging of human stem cell-derived retinal organoids uncovers accelerated photoreceptor differentiation by 9-cis retinal.

Molecular vision

Avec: Koray D Kaya , Holly Y Chen , Matthew J Brooks , Ryan A Kelley , Hiroko Shimada , Kunio Nagashima , Natalia de Val , Charles T Drinnan , Linn Gieser , Kamil Kruczek , Slaven Erceg , Tiansen Li , Dunja Lukovic , Yogita K Adlakha , Emily Welby , Anand Swaroop

Adherence to a Mediterranean diet and cognitive function in the Age-Related Eye Disease Studies 1 & 2.

Alzheimer's & dementia : the journal of the Alzheimer's Association

Avec: Tiarnán D Keenan , Elvira Agrón , Julie A Mares , Traci E Clemons , Freekje van Asten , Anand Swaroop , Emily Y Chew , Auteur inconnu

Tbx2a Modulates Switching of RH2 and LWS Opsin Gene Expression.

Molecular biology and evolution

Avec: Benjamin A Sandkam , Laura Campello , Conor O'Brien , Sri Pratima Nandamuri , William J Gammerdinger , Matthew A Conte , Anand Swaroop , Karen L Carleton

Genome-wide Profiling Identifies DNA Methylation Signatures of Aging in Rod Photoreceptors Associated with Alterations in Energy Metabolism.

Cell reports

Avec: Ximena Corso-Díaz , James Gentry , Ryan Rebernick , Catherine Jaeger , Matthew J Brooks , Freekje van Asten , Keshav Kooragayala , Linn Gieser , Jacob Nellissery , Raul Covian , Tiziana Cogliati , Anupam K Mondal , Ke Jiang , Anand Swaroop

HiCRes: a computational method to estimate and predict the genomic resolution of Hi-C libraries.

Nucleic acids research

Avec: Claire Marchal , Nivedita Singh , Ximena Corso-Díaz , Anand Swaroop

Nicotinamide Promotes Formation of Retinal Organoids From Human Pluripotent Stem Cells

Frontiers in cellular neuroscience

Avec: Florian Regent , Zachary Batz , Ryan A Kelley , Linn Gieser , Anand Swaroop , Holly Y Chen , Tiansen Li

Epigenome-metabolism nexus in the retina: implications for aging and disease.

Trends in genetics : TIG

Avec: Anupam K Mondal , Mohita Gaur , Jayshree Advani , Anand Swaroop

Long wavelength-sensing cones of zebrafish retina exhibit multiple layers of transcriptional heterogeneity.

Frontiers in cellular neuroscience

Avec: Ashley A Farre , Chi Sun , Margaret R Starostik , Samuel S Hunter , Milton A English , Audrey Duncan , Abirami Santhanam , Eyad Shihabeddin , John O'Brien , Anand Swaroop , Deborah L Stenkamp

Network Biology and Medicine to Rescue: Applications for Retinal Disease Mechanisms and Therapy.

Advances in experimental medicine and biology

Avec: Anupam K Mondal , Anand Swaroop

Integrating genetic regulation and single-cell expression with GWAS prioritizes causal genes and cell types for glaucoma.

Nature communications

Avec: Andrew R Hamel , Wenjun Yan , John M Rouhana , Aboozar Monovarfeshani , Xinyi Jiang , Puja A Mehta , Jayshree Advani , Yuyang Luo , Qingnan Liang , Skanda Rajasundaram , Arushi Shrivastava , Katherine Duchinski , Sreekar Mantena , Jiali Wang , Tavé van Zyl , Louis R Pasquale , Anand Swaroop , Puya Gharahkhani , Anthony P Khawaja , Stuart MacGregor , Auteur inconnu , Rui Chen , Veronique Vitart , Joshua R Sanes , Janey L Wiggs , Ayellet V Segrè

Selective transcriptomic dysregulation of metabolic pathways in liver and retina by short- and long-term dietary hyperglycemia.

iScience

Avec: Anupam K Mondal , Daniel C Brock , Sheldon Rowan , Zhi-Hong Yang , Krishna Vamsi Rojulpote , Kelsey M Smith , Sarah G Francisco , Eloy Bejarano , Milton A English , Amy Deik , Sarah Jeanfavre , Clary B Clish , Alan T Remaley , Allen Taylor , Anand Swaroop

Emc1 is essential for vision and zebrafish photoreceptor outer segment morphogenesis.

FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Avec: Tess McCann , Husvinee Sundaramurthi , Ciara Walsh , Sanamjeet Virdi , Yolanda Alvarez , Beata Sapetto-Rebow , Ross F Collery , Stephen P Carter , Ailis Moran , Ruth Mulholland , John J O'Connor , Michael R Taylor , Nora Rauch , Margaret R Starostik , Milton A English , Anand Swaroop , Robert Geisler , Alison L Reynolds , Breandán N Kennedy

Adherence to the Mediterranean Diet and Progression to Late Age-Related Macular Degeneration in the Age-Related Eye Disease Studies 1 and 2.

Ophthalmology

Avec: Tiarnán D Keenan , Elvira Agrón , Julie Mares , Traci E Clemons , Freekje van Asten , Anand Swaroop , Emily Y Chew , Auteur inconnu

Pluripotent stem cell-derived retinal organoids for disease modeling and development of therapies.

Stem cells (Dayton, Ohio)

Avec: Kamil Kruczek , Anand Swaroop

Accelerated Development of Rod Photoreceptors in Retinal Organoids Derived from Human Pluripotent Stem Cells by Supplementation with 9-

STAR protocols

Avec: Ryan A Kelley , Holly Y Chen , Anand Swaroop , Tiansen Li

Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration.

Nature genetics

Avec: Rinki Ratnapriya , Olukayode A Sosina , Margaret R Starostik , Madeline Kwicklis , Rebecca J Kapphahn , Lars G Fritsche , Ashley Walton , Marios Arvanitis , Linn Gieser , Alexandra Pietraszkiewicz , Sandra R Montezuma , Emily Y Chew , Alexis Battle , Gonçalo R Abecasis , Deborah A Ferrington , Nilanjan Chatterjee , Anand Swaroop

Association of age-related macular degeneration with complement activation products, smoking, and single nucleotide polymorphisms in South Carolinians of European and African descent.

Molecular vision

Avec: Bärbel Rohrer , Ashley Frazer-Abel , Anthony Leonard , Rinki Ratnapriya , Tyson Ward , Alexandra Pietraszkiewicz , Elizabeth O'Quinn , Katherine Adams , Anand Swaroop , Bethany Jacobs Wolf

Making Biological Sense of Genetic Studies of Age-Related Macular Degeneration.

Advances in experimental medicine and biology

Avec: Nivedita Singh , Anand Swaroop , Rinki Ratnapriya

Integration of genomics and transcriptomics predicts diabetic retinopathy susceptibility genes.

eLife

Avec: Andrew D Skol , Segun C Jung , Ana Marija Sokovic , Siquan Chen , Sarah Fazal , Olukayode Sosina , Poulami P Borkar , Amy Lin , Maria Sverdlov , Dingcai Cao , Anand Swaroop , Ionut Bebu , Auteur inconnu , Barbara E Stranger , Michael A Grassi

Gene Therapy of Dominant CRX-Leber Congenital Amaurosis using Patient Stem Cell-Derived Retinal Organoids.

Stem cell reports

Avec: Kamil Kruczek , Zepeng Qu , James Gentry , Benjamin R Fadl , Linn Gieser , Suja Hiriyanna , Zachary Batz , Mugdha Samant , Ananya Samanta , Colin J Chu , Laura Campello , Brian P Brooks , Zhijian Wu , Anand Swaroop

A Novel

Frontiers in cell and developmental biology

Avec: Rinki Ratnapriya , Samuel G Jacobson , Artur V Cideciyan , Milton A English , Alejandro J Roman , Alexander Sumaroka , Rebecca Sheplock , Anand Swaroop

Ultra-rare complement factor 8 coding variants in families with age-related macular degeneration.

iScience

Avec: Lina Zelinger , Tammy M Martin , Jayshree Advani , Laura Campello , Milton A English , Alan Kwong , Claire Weber , Jennifer Maykoski , Yuri V Sergeev , Robert Fariss , Emily Y Chew , Michael L Klein , Anand Swaroop

QTL mapping of human retina DNA methylation identifies 87 gene-epigenome interactions in age-related macular degeneration.

Nature communications

Avec: Jayshree Advani , Puja A Mehta , Andrew R Hamel , Sudeep Mehrotra , Christina Kiel , Tobias Strunz , Ximena Corso-Díaz , Madeline Kwicklis , Freekje van Asten , Rinki Ratnapriya , Emily Y Chew , Dena G Hernandez , Sandra R Montezuma , Deborah A Ferrington , Bernhard H F Weber , Ayellet V Segrè , Anand Swaroop

A mega-analysis of expression quantitative trait loci in retinal tissue.

PLoS genetics

Avec: Tobias Strunz , Christina Kiel , Felix Grassmann , Rinki Ratnapriya , Madeline Kwicklis , Marcus Karlstetter , Sascha Fauser , Nicole Arend , Anand Swaroop , Thomas Langmann , Armin Wolf , Bernhard H F Weber

Soy Protein Nanofiber Scaffolds for Uniform Maturation of Human Induced Pluripotent Stem Cell-Derived Retinal Pigment Epithelium.

Tissue engineering. Part C, Methods

Avec: Michael A Phelan , Kamil Kruczek , John H Wilson , Matthew J Brooks , Charles T Drinnan , Florian Regent , Jonathan A Gerstenhaber , Anand Swaroop , Peter I Lelkes , Tiansen Li

Age-related changes of the retinal microvasculature.

PloS one

Avec: Nikita V Orlov , Cristopher Coletta , Freekje van Asten , Yong Qian , Jun Ding , Majd AlGhatrif , Edward Lakatta , Emily Chew , Wai Wong , Anand Swaroop , Edoardo Fiorillo , Alessandro Delitala , Michele Marongiu , Ilya G Goldberg , David Schlessinger

Targeted deletion of an NRL- and CRX-regulated alternative promoter specifically silences FERM and PDZ domain containing 1 (Frmpd1) in rod photoreceptors.

Human molecular genetics

Avec: Christie K Campla , Hannah Mast , Lijin Dong , Jingqi Lei , Stephanie Halford , Sumathi Sekaran , Anand Swaroop

Author Correction: Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration.

Nature genetics

Loss of endocytosis-associated RabGEF1 causes aberrant morphogenesis and altered autophagy in photoreceptors leading to retinal degeneration.

PLoS genetics

Avec: Passley Hargrove-Grimes , Anupam K Mondal , Jessica Gumerson , Jacob Nellissery , Angel M Aponte , Linn Gieser , Haohua Qian , Robert N Fariss , Juan S Bonifacino , Tiansen Li , Anand Swaroop

Methylation of two-component response regulator MtrA in mycobacteria negatively modulates its DNA binding and transcriptional activation.

The Biochemical journal

Avec: Anshika Singhal , Richa Virmani , Saba Naz , Gunjan Arora , Mohita Gaur , Parijat Kundu , Andaleeb Sajid , Richa Misra , Ankita Dabla , Suresh Kumar , Jacob Nellissery , Virginie Molle , Ulf Gerth , Anand Swaroop , Kirti Sharma , Vinay K Nandicoori , Yogendra Singh

Determination of Mitochondrial Respiration and Glycolysis in Ex Vivo Retinal Tissue Samples.

Journal of visualized experiments : JoVE

Avec: Ke Jiang , Jacob Nellissery , Anand Swaroop

Divergent Effects of HSP70 Overexpression in Photoreceptors During Inherited Retinal Degeneration.

Investigative ophthalmology & visual science

Avec: Ke Jiang , Elizabeth Fairless , Atsuhiro Kanda , Norimoto Gotoh , Tiziana Cogliati , Tiansen Li , Anand Swaroop

Réseau de co-auteurs

Tiansen Li 7 collaborations

Linn Gieser 7 collaborations

Rinki Ratnapriya 7 collaborations

Anupam K Mondal 6 collaborations

Emily Y Chew 6 collaborations

Holly Y Chen 5 collaborations

Freekje van Asten 5 collaborations

Milton A English 5 collaborations

Matthew J Brooks 4 collaborations

Ryan A Kelley 4 collaborations

Kamil Kruczek 4 collaborations

None None 4 collaborations

Jacob Nellissery 4 collaborations

Jayshree Advani 4 collaborations

Margaret R Starostik 4 collaborations

Madeline Kwicklis 4 collaborations

Laura Campello 3 collaborations

Ximena Corso-Díaz 3 collaborations

Ke Jiang 3 collaborations

Alexandra Pietraszkiewicz 3 collaborations

Sandra R Montezuma 3 collaborations

Deborah A Ferrington 3 collaborations

Kunio Nagashima 2 collaborations

Charles T Drinnan 2 collaborations

Tiarnán D Keenan 2 collaborations

Elvira Agrón 2 collaborations

Traci E Clemons 2 collaborations

James Gentry 2 collaborations

Tiziana Cogliati 2 collaborations

Nivedita Singh 2 collaborations

Florian Regent 2 collaborations

Zachary Batz 2 collaborations

Mohita Gaur 2 collaborations

Andrew R Hamel 2 collaborations

Puja A Mehta 2 collaborations

Ayellet V Segrè 2 collaborations

Olukayode A Sosina 2 collaborations

Rebecca J Kapphahn 2 collaborations

Lars G Fritsche 2 collaborations

Ashley Walton 2 collaborations

Marios Arvanitis 2 collaborations

Alexis Battle 2 collaborations

Gonçalo R Abecasis 2 collaborations

Nilanjan Chatterjee 2 collaborations

Christina Kiel 2 collaborations

Tobias Strunz 2 collaborations

Bernhard H F Weber 2 collaborations

Ordan J Lehmann 1 collaboration

Natalia De Val 1 collaboration

Vijender Chaitankar 1 collaboration

Koray D Kaya 1 collaboration

Hiroko Shimada 1 collaboration

Natalia de Val 1 collaboration

Slaven Erceg 1 collaboration

Dunja Lukovic 1 collaboration

Yogita K Adlakha 1 collaboration

Emily Welby 1 collaboration

Julie A Mares 1 collaboration

Benjamin A Sandkam 1 collaboration

Conor O'Brien 1 collaboration

Sri Pratima Nandamuri 1 collaboration

William J Gammerdinger 1 collaboration

Matthew A Conte 1 collaboration

Karen L Carleton 1 collaboration

Ryan Rebernick 1 collaboration

Catherine Jaeger 1 collaboration

Keshav Kooragayala 1 collaboration

Raul Covian 1 collaboration

Claire Marchal 1 collaboration

Ashley A Farre 1 collaboration

Chi Sun 1 collaboration

Samuel S Hunter 1 collaboration

Audrey Duncan 1 collaboration

Abirami Santhanam 1 collaboration

Eyad Shihabeddin 1 collaboration

John O'Brien 1 collaboration

Deborah L Stenkamp 1 collaboration

Wenjun Yan 1 collaboration

John M Rouhana 1 collaboration

Aboozar Monovarfeshani 1 collaboration

Xinyi Jiang 1 collaboration

Yuyang Luo 1 collaboration

Qingnan Liang 1 collaboration

Skanda Rajasundaram 1 collaboration

Arushi Shrivastava 1 collaboration

Katherine Duchinski 1 collaboration

Sreekar Mantena 1 collaboration

Jiali Wang 1 collaboration

Tavé van Zyl 1 collaboration

Louis R Pasquale 1 collaboration

Puya Gharahkhani 1 collaboration

Anthony P Khawaja 1 collaboration

Stuart MacGregor 1 collaboration

Rui Chen 1 collaboration

Veronique Vitart 1 collaboration

Joshua R Sanes 1 collaboration

Janey L Wiggs 1 collaboration

Daniel C Brock 1 collaboration

Sheldon Rowan 1 collaboration

Zhi-Hong Yang 1 collaboration

Krishna Vamsi Rojulpote 1 collaboration

Kelsey M Smith 1 collaboration

Sarah G Francisco 1 collaboration

Eloy Bejarano 1 collaboration

Amy Deik 1 collaboration

Sarah Jeanfavre 1 collaboration

Clary B Clish 1 collaboration

Alan T Remaley 1 collaboration

Allen Taylor 1 collaboration

Tess McCann 1 collaboration

Husvinee Sundaramurthi 1 collaboration

Ciara Walsh 1 collaboration

Sanamjeet Virdi 1 collaboration

Yolanda Alvarez 1 collaboration

Beata Sapetto-Rebow 1 collaboration

Ross F Collery 1 collaboration

Stephen P Carter 1 collaboration

Ailis Moran 1 collaboration

Ruth Mulholland 1 collaboration

John J O'Connor 1 collaboration

Michael R Taylor 1 collaboration

Nora Rauch 1 collaboration

Robert Geisler 1 collaboration

Alison L Reynolds 1 collaboration

Breandán N Kennedy 1 collaboration

Julie Mares 1 collaboration

Bärbel Rohrer 1 collaboration

Ashley Frazer-Abel 1 collaboration

Anthony Leonard 1 collaboration

Tyson Ward 1 collaboration

Elizabeth O'Quinn 1 collaboration

Katherine Adams 1 collaboration

Bethany Jacobs Wolf 1 collaboration

Andrew D Skol 1 collaboration

Segun C Jung 1 collaboration

Ana Marija Sokovic 1 collaboration

Siquan Chen 1 collaboration

Sarah Fazal 1 collaboration

Olukayode Sosina 1 collaboration

Poulami P Borkar 1 collaboration

Amy Lin 1 collaboration

Maria Sverdlov 1 collaboration

Dingcai Cao 1 collaboration

Ionut Bebu 1 collaboration

Barbara E Stranger 1 collaboration

Michael A Grassi 1 collaboration

Zepeng Qu 1 collaboration

Benjamin R Fadl 1 collaboration

Suja Hiriyanna 1 collaboration

Mugdha Samant 1 collaboration

Ananya Samanta 1 collaboration

Colin J Chu 1 collaboration

Brian P Brooks 1 collaboration

Zhijian Wu 1 collaboration

Samuel G Jacobson 1 collaboration

Artur V Cideciyan 1 collaboration

Alejandro J Roman 1 collaboration

Alexander Sumaroka 1 collaboration

Rebecca Sheplock 1 collaboration

Lina Zelinger 1 collaboration

Tammy M Martin 1 collaboration

Alan Kwong 1 collaboration

Claire Weber 1 collaboration

Jennifer Maykoski 1 collaboration

Yuri V Sergeev 1 collaboration

Robert Fariss 1 collaboration

Michael L Klein 1 collaboration

Sudeep Mehrotra 1 collaboration

Dena G Hernandez 1 collaboration

Felix Grassmann 1 collaboration

Marcus Karlstetter 1 collaboration

Sascha Fauser 1 collaboration

Nicole Arend 1 collaboration

Thomas Langmann 1 collaboration

Armin Wolf 1 collaboration

Michael A Phelan 1 collaboration

John H Wilson 1 collaboration

Jonathan A Gerstenhaber 1 collaboration

Peter I Lelkes 1 collaboration

Nikita V Orlov 1 collaboration

Cristopher Coletta 1 collaboration

Yong Qian 1 collaboration

Jun Ding 1 collaboration

Majd AlGhatrif 1 collaboration

Edward Lakatta 1 collaboration

Emily Chew 1 collaboration

Wai Wong 1 collaboration

Edoardo Fiorillo 1 collaboration

Alessandro Delitala 1 collaboration

Michele Marongiu 1 collaboration

Ilya G Goldberg 1 collaboration

David Schlessinger 1 collaboration

Christie K Campla 1 collaboration

Hannah Mast 1 collaboration

Lijin Dong 1 collaboration

Jingqi Lei 1 collaboration

Stephanie Halford 1 collaboration

Sumathi Sekaran 1 collaboration

Passley Hargrove-Grimes 1 collaboration

Jessica Gumerson 1 collaboration

Angel M Aponte 1 collaboration

Haohua Qian 1 collaboration

Robert N Fariss 1 collaboration

Juan S Bonifacino 1 collaboration

Anshika Singhal 1 collaboration

Richa Virmani 1 collaboration

Saba Naz 1 collaboration

Gunjan Arora 1 collaboration

Parijat Kundu 1 collaboration

Andaleeb Sajid 1 collaboration

Richa Misra 1 collaboration

Ankita Dabla 1 collaboration

Suresh Kumar 1 collaboration

Virginie Molle 1 collaboration

Ulf Gerth 1 collaboration

Kirti Sharma 1 collaboration

Vinay K Nandicoori 1 collaboration

Yogendra Singh 1 collaboration

Elizabeth Fairless 1 collaboration

Atsuhiro Kanda 1 collaboration

Norimoto Gotoh 1 collaboration