Whole-genome sequence analysis of carbapenem-resistant Enterobacteriaceae recovered from hospitalized patients.


Journal

Journal of global antimicrobial resistance
ISSN: 2213-7173
Titre abrégé: J Glob Antimicrob Resist
Pays: Netherlands
ID NLM: 101622459

Informations de publication

Date de publication:
09 2023
Historique:
received: 31 01 2023
revised: 29 05 2023
accepted: 05 07 2023
medline: 11 9 2023
pubmed: 13 7 2023
entrez: 12 7 2023
Statut: ppublish

Résumé

Carbapenems are among the few effective antibiotics against multidrug-resistant Enterobacteriaceae. This study aimed at characterizing the plasmid content and resistome of clinical carbapenem-resistant Enterobacteriaceae (CRE) recovered from 2016 to 2019 from hospitalized patients in Lebanon. Plasmid typing and whole-genome sequencing were used to study the genomic characteristics of 65 clinical CREs including 27 Escherichia coli, 24 Klebsiella pneumoniae, one Klebsiella quasipneumoniae, three Morganella morganii, three Citrobacter freundii, five Enterobacter hormaechei, and two Serratia marcescens. bla We analysed the clonality and resistance determinants of 65 multidrug-resistant (MDR) Enterobacteriaceae recovered in the period from 2016 to 2019 from a large tertiary hospital in Lebanon. NDM variants, OXA-48, and OXA-181 were the most prevalent detected carbapenemases and were mostly linked to the dissemination of IncL, IncX3, and IncF. This study reinforces the need to track the spread and dominance of clinically relevant carbapenemase-encoding plasmids in healthcare settings.

Identifiants

pubmed: 37437842
pii: S2213-7165(23)00108-X
doi: 10.1016/j.jgar.2023.07.004
pii:
doi:

Substances chimiques

Anti-Bacterial Agents 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

150-160

Informations de copyright

Copyright © 2023 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Auteurs

Maria El Khoury (M)

Department of Natural Sciences, Lebanese American University, Byblos, Lebanon.

Tamara Salloum (T)

Department of Natural Sciences, Lebanese American University, Byblos, Lebanon.

Ibrahim Al Kodsi (I)

Department of Natural Sciences, Lebanese American University, Byblos, Lebanon.

Tamima Jisr (T)

Makassed General Hospital, Hopital Makassed Street, Beirut, Lebanon.

Mira El Chaar (M)

Faculty of Health Sciences, University of Balamand, Beirut, Lebanon.

Sima Tokajian (S)

Department of Natural Sciences, Lebanese American University, Byblos, Lebanon. Electronic address: stokajian@lau.edu.lb.

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Classifications MeSH