Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
13 07 2023
Historique:
received: 28 01 2023
accepted: 29 06 2023
medline: 17 7 2023
pubmed: 14 7 2023
entrez: 13 7 2023
Statut: epublish

Résumé

Infectious protein crystals are an essential part of the viral lifecycle for double-stranded DNA Baculoviridae and double-stranded RNA cypoviruses. These viral protein crystals, termed occlusion bodies or polyhedra, are dense protein assemblies that form a crystalline array, encasing newly formed virions. Here, using X-ray crystallography we determine the structure of a polyhedrin from Nudiviridae. This double-stranded DNA virus family is a sister-group to the baculoviruses, whose members were thought to lack occlusion bodies. The 70-year-old sample contains a well-ordered lattice formed by a predominantly α-helical building block that assembles into a dense, highly interconnected protein crystal. The lattice is maintained by extensive hydrophobic and electrostatic interactions, disulfide bonds, and domain switching. The resulting lattice is resistant to most environmental stresses. Comparison of this structure to baculovirus or cypovirus polyhedra shows a distinct protein structure, crystal space group, and unit cell dimensions, however, all polyhedra utilise common principles of occlusion body assembly.

Identifiants

pubmed: 37443157
doi: 10.1038/s41467-023-39819-1
pii: 10.1038/s41467-023-39819-1
pmc: PMC10345106
doi:

Substances chimiques

Viral Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

4160

Subventions

Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 200835/Z/16/Z
Pays : United Kingdom

Informations de copyright

© 2023. The Author(s).

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Auteurs

Jeremy R Keown (JR)

Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK. Jeremy@strubi.ox.ac.uk.

Adam D Crawshaw (AD)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Jose Trincao (J)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Loïc Carrique (L)

Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.

Richard J Gildea (RJ)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Sam Horrell (S)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Anna J Warren (AJ)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Danny Axford (D)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Robin Owen (R)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.

Gwyndaf Evans (G)

Diamond Light Source Ltd, Harwell Science & Innovation Campus, Didcot, UK.
Rosalind Franklin Institute, Harwell Campus, Didcot, UK.

Annie Bézier (A)

Institut de Recherche sur la Biologie de l'Insecte (IRBI), UMR7261 CNRS-Université de Tours, Tours, France.

Peter Metcalf (P)

School of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand.

Jonathan M Grimes (JM)

Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK. Jonathan@strubi.ox.ac.uk.

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Classifications MeSH