Improving Diagnostics with Deep Forest Applied to Electronic Health Records.

deep learning deep random forest electronic health record intensive care unit representation learning

Journal

Sensors (Basel, Switzerland)
ISSN: 1424-8220
Titre abrégé: Sensors (Basel)
Pays: Switzerland
ID NLM: 101204366

Informations de publication

Date de publication:
21 Jul 2023
Historique:
received: 30 05 2023
revised: 08 07 2023
accepted: 14 07 2023
medline: 31 7 2023
pubmed: 29 7 2023
entrez: 29 7 2023
Statut: epublish

Résumé

An electronic health record (EHR) is a vital high-dimensional part of medical concepts. Discovering implicit correlations in the information of this data set and the research and informative aspects can improve the treatment and management process. The challenge of concern is the data sources' limitations in finding a stable model to relate medical concepts and use these existing connections. This paper presents Patient Forest, a novel end-to-end approach for learning patient representations from tree-structured data for readmission and mortality prediction tasks. By leveraging statistical features, the proposed model is able to provide an accurate and reliable classifier for predicting readmission and mortality. Experiments on MIMIC-III and eICU datasets demonstrate Patient Forest outperforms existing machine learning models, especially when the training data are limited. Additionally, a qualitative evaluation of Patient Forest is conducted by visualising the learnt representations in 2D space using the t-SNE, which further confirms the effectiveness of the proposed model in learning EHR representations.

Identifiants

pubmed: 37514865
pii: s23146571
doi: 10.3390/s23146571
pmc: PMC10384165
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : National Institute for Health Research
ID : We're awaiting this from the funder

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Auteurs

Atieh Khodadadi (A)

Institute of Applied Informatics and Formal Description Methods, Karlsruhe Institute of Technology, 76133 Karlsruhe, Germany.

Nima Ghanbari Bousejin (N)

Independent Researcher, Tehran 009821, Iran.

Soheila Molaei (S)

Department of Engineering Science, University of Oxford, Oxford OX1 3AZ, UK.

Vinod Kumar Chauhan (V)

Department of Engineering Science, University of Oxford, Oxford OX1 3AZ, UK.

Tingting Zhu (T)

Department of Engineering Science, University of Oxford, Oxford OX1 3AZ, UK.

David A Clifton (DA)

Department of Engineering Science, University of Oxford, Oxford OX1 3AZ, UK.
Oxford-Suzhou Centre for Advanced Research (OSCAR), Suzhou 215123, China.

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