DTAmetasa: An R shiny application for meta-analysis of diagnostic test accuracy and sensitivity analysis of publication bias.

R shiny application diagnostic test accuracy meta-analysis publication bias sensitivity analysis

Journal

Research synthesis methods
ISSN: 1759-2887
Titre abrégé: Res Synth Methods
Pays: England
ID NLM: 101543738

Informations de publication

Date de publication:
Nov 2023
Historique:
revised: 12 07 2023
received: 04 02 2023
accepted: 15 08 2023
medline: 8 11 2023
pubmed: 29 8 2023
entrez: 28 8 2023
Statut: ppublish

Résumé

Meta-analysis of diagnostic test accuracy (DTA) is a powerful statistical method for synthesizing and evaluating the diagnostic capacity of medical tests and has been extensively used by clinical physicians and healthcare decision-makers. However, publication bias (PB) threatens the validity of meta-analysis of DTA. Some statistical methods have been developed to deal with PB in meta-analysis of DTA, but implementing these methods requires high-level statistical knowledge and programming skill. To assist non-technical users in running most routines in meta-analysis of DTA and handling with PB, we developed an interactive application, DTAmetasa. DTAmetasa is developed as a web-based graphical user interface based on the R shiny framework. It allows users to upload data and conduct meta-analysis of DTA by "point and click" operations. Moreover, DTAmetasa provides the sensitivity analysis of PB and presents the graphical results to evaluate the magnitude of the PB under various publication mechanisms. In this study, we introduce the functionalities of DTAmetasa and use the real-world meta-analysis to show its capacity for dealing with PB.

Identifiants

pubmed: 37640914
doi: 10.1002/jrsm.1666
doi:

Types de publication

Meta-Analysis Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

916-925

Subventions

Organisme : Grant-in-Aid for Challenging Exploratory Research
ID : 16K12403
Organisme : Ministry of Education, Science, Sports and Technology of Japan
ID : 18H03208
Organisme : Ministry of Education, Science, Sports and Technology of Japan
ID : 16H06299

Informations de copyright

© 2023 John Wiley & Sons Ltd.

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Auteurs

Shosuke Mizutani (S)

Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan.

Yi Zhou (Y)

Beijing International Center for Mathematical Research, Peking University, Beijing, China.
Department of Biomedical Statistics, Graduate School of Medicine, Osaka University, Osaka, Japan.

Yu-Shi Tian (YS)

Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan.

Tatsuya Takagi (T)

Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan.

Tadayasu Ohkubo (T)

Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan.

Satoshi Hattori (S)

Department of Biomedical Statistics, Graduate School of Medicine, Osaka University, Osaka, Japan.
Integrated Frontier Research for Open and Transdisciplinary Research Initiatives, Graduate School of Medicine, Osaka University, Osaka, Japan.

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