Functional conservation of microbial communities determines composition predictability in anaerobic digestion.


Journal

The ISME journal
ISSN: 1751-7370
Titre abrégé: ISME J
Pays: England
ID NLM: 101301086

Informations de publication

Date de publication:
11 2023
Historique:
received: 30 04 2023
accepted: 29 08 2023
revised: 24 08 2023
pmc-release: 01 11 2024
medline: 23 10 2023
pubmed: 5 9 2023
entrez: 4 9 2023
Statut: ppublish

Résumé

A major challenge in managing and engineering microbial communities is determining whether and how microbial community responses to environmental alterations can be predicted and explained, especially in microorganism-driven systems. We addressed this challenge by monitoring microbial community responses to the periodic addition of the same feedstock throughout anaerobic digestion, a typical microorganism-driven system where microorganisms degrade and transform the feedstock. The immediate and delayed response consortia were assemblages of microorganisms whose abundances significantly increased on the first or third day after feedstock addition. The immediate response consortia were more predictable than the delayed response consortia and showed a reproducible and predictable order-level composition across multiple feedstock additions. These results stood in both present (16 S rRNA gene) and potentially active (16 S rRNA) microbial communities and in different feedstocks with different biodegradability and were validated by simulation modeling. Despite substantial species variability, the immediate response consortia aligned well with the reproducible CH

Identifiants

pubmed: 37666974
doi: 10.1038/s41396-023-01505-x
pii: 10.1038/s41396-023-01505-x
pmc: PMC10579369
doi:

Substances chimiques

RNA, Ribosomal, 16S 0
RNA, Ribosomal 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1920-1930

Informations de copyright

© 2023. The Author(s), under exclusive licence to International Society for Microbial Ecology.

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Auteurs

Qiang Lin (Q)

Key Laboratory of Environmental and Applied Microbiology, CAS; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.

Lingjuan Li (L)

Department of Biology, University of Antwerp, 2610, Wilrijk, Belgium.

Jo De Vrieze (J)

Center for Microbial Ecology and Technology (CMET), Ghent University, Coupure Links 653, Ghent, 9000, Belgium.

Chaonan Li (C)

Key Laboratory of Environmental and Applied Microbiology, CAS; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.

Xiaoyu Fang (X)

Key Laboratory of Environmental and Applied Microbiology, CAS; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.

Xiangzhen Li (X)

Key Laboratory of Environmental and Applied Microbiology, CAS; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China. lixz2015@163.com.

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