Quantitative morphological transformation of vascular bundles in the culm of moso bamboo (Phyllostachys pubescens).


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2023
Historique:
received: 16 02 2023
accepted: 14 08 2023
medline: 25 9 2023
pubmed: 21 9 2023
entrez: 21 9 2023
Statut: epublish

Résumé

Vascular bundles of bamboo are determinants for mechanical properties of bamboo material and for physiological properties of living bamboo. The morphology of vascular bundles reflecting mechanical and physiological functions differs not only within internode tissue but also among different internodes in the culm. Although the distribution of vascular bundle fibers has received much attention, quantitative evaluation of the morphological transformation of vascular bundles associated with spatial distribution patterns has been limited. In this study deep learning models were used to determine quantitative changes in the distribution and morphology of vascular bundles in the culms of moso bamboo (Phyllostachys pubescens). A precise model for extracting vascular bundles from cross-sectional images was constructed using the U-Net model. Analyses of extracted vascular bundles from different internodes showed significant changes in vascular bundle distribution and morphology among internodes. Vascular bundles in lower internodes showed outer relative position and larger area than those in upper internodes. Aspect ratio and eccentricity indicate that vascular bundles in internodes near the base have more elliptical morphology, with a long axis in the radial direction. The variational autoencoder model using extracted vascular bundles enabled simulation of the morphological transformation of vascular bundles along with radial direction. These deep learning models enabled highly accurate quantification of vascular bundle morphologies, and will contribute to a further understanding of bamboo development as well as evaluation of the mechanical and physiological properties of bamboo.

Identifiants

pubmed: 37733783
doi: 10.1371/journal.pone.0290732
pii: PONE-D-23-04574
pmc: PMC10513337
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0290732

Informations de copyright

Copyright: © 2023 Tsuyama et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

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pubmed: 33910606
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pubmed: 29588649
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pubmed: 25037399
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pubmed: 31404108
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pubmed: 26986361
Physiol Plant. 2002 Feb;114(2):296-302
pubmed: 11903977

Auteurs

Taku Tsuyama (T)

Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan.

Kensei Hamai (K)

Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan.

Yoshio Kijidani (Y)

Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan.

Junji Sugiyama (J)

Graduate School of Agriculture, Kyoto University, Kyoto, Japan.

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Classifications MeSH