Recommendations on data sharing in HIV drug resistance research.


Journal

PLoS medicine
ISSN: 1549-1676
Titre abrégé: PLoS Med
Pays: United States
ID NLM: 101231360

Informations de publication

Date de publication:
Sep 2023
Historique:
revised: 06 10 2023
medline: 15 2 2024
pubmed: 22 9 2023
entrez: 22 9 2023
Statut: epublish

Résumé

 • Human immunodeficiency virus (HIV) drug resistance has implications for antiretroviral treatment strategies and for containing the HIV pandemic because the development of HIV drug resistance leads to the requirement for antiretroviral drugs that may be less effective, less well-tolerated, and more expensive than those used in first-line regimens.  • HIV drug resistance studies are designed to determine which HIV mutations are selected by antiretroviral drugs and, in turn, how these mutations affect antiretroviral drug susceptibility and response to future antiretroviral treatment regimens.  • Such studies collectively form a vital knowledge base essential for monitoring global HIV drug resistance trends, interpreting HIV genotypic tests, and updating HIV treatment guidelines.  • Although HIV drug resistance data are collected in many studies, such data are often not publicly shared, prompting the need to recommend best practices to encourage and standardize HIV drug resistance data sharing.  • In contrast to other viruses, sharing HIV sequences from phylogenetic studies of transmission dynamics requires additional precautions as HIV transmission is criminalized in many countries and regions.  • Our recommendations are designed to ensure that the data that contribute to HIV drug resistance knowledge will be available without undue hardship to those publishing HIV drug resistance studies and without risk to people living with HIV.

Identifiants

pubmed: 37738247
doi: 10.1371/journal.pmed.1004293
pii: PMEDICINE-D-23-01241
pmc: PMC10558071
doi:

Substances chimiques

Anti-Retroviral Agents 0
Anti-HIV Agents 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1004293

Subventions

Organisme : Medical Research Council
ID : MC_UU_00033/1
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/K019708/1
Pays : United Kingdom
Organisme : NIAID NIH HHS
ID : R24 AI136618
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI068634
Pays : United States

Informations de copyright

Copyright: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.

Déclaration de conflit d'intérêts

SJL has received research funding paid to her institution from Gilead Sciences. VC has received travel grants, advisor honorarium and research grant from Merck Sharp & Dohme, ViiV Healthcare and Gilead Sciences. FCS has been a consultant to ViiV Healthcare, Gilead Sciences and Merck Sharp & Dohme, and received research grants paid to her institution from Gilead Sciences. CC has received honoraria and conference travels grants from Merck Sharp & Dohme, Gilead Sciences, and ViiV Healthcare. DD has received honoraria for participation in advisory boards and conference travel grants ViiV Healthcare, Gilead Sciences, Janssen Pharmaceuticals, and Merck Sharp & Dohme. LF has received NIH research grants paid to her institution. RKG has received honoraria for participation on advisory boards from Gilead-Sciences and GlaxoSmithKline. RDK has received research grants from Gilead Sciences paid to his institution. DRK is a consultant to and has received honoraria from AbbVie, Gilead Sciences, GlaxoSmithKline, Janssen Pharmaceuticals, Merck, Roche, and ViiV Healthcare. DRK has also received honoraria from Gilead for expert testimony and speaking fees from Gilead Sciences and Janssen Pharmaceuticals and has received research support paid to his institution from Gilead Sciences, Merck, and ViiV Healthcare. AGM received travel grants, honoraria and study grants from Gilead Sciences, Merck Sharp & Dohme, ViiV Healthcare, GlaxoSmithKline, Roche, and Astra Zeneca. RP has received research grants paid to his institution from Merck Sharp & Dohme and ViiV Healthcare and consulting fees from Gilead Sciences, Merck Sharp & Dohme, GlaxoSmithKline, Atea Pharmaceuticals, Roche, and Shinogi Pharmaceuticals. PCS is a co-founder of, shareholder in, and consultant to Sherlock Biosciences and Delve Bio, and a board member of and shareholder in Danaher Corporation. JMS has received research support, honorarium, or consulting fees from the following: Abbvie, Merck, Gilead Sciences, GlaxoSmithKline, Tibotec-Janssen, Teva, Virology Education and ViiV Healthcare. He has received travel support and stipends for advisory work for the World Health Organization. WS has received speaking honoraria from GlaxoSmithKline, ViiV Healthcare, Merck Sharp & Dohme, Pfizer, and Abbott Pharmaceuticals. AMJW has received research support paid to her institution by Gilead Sciences and has consulted for Gilead Sciences and ViiV Healthcare. JOW receives funding from grants and contracts to his institution from NIH and CDC pertaining to work on HIV molecular epidemiology. HFG has received grants paid to his institution from Gilead Sciences, and Roche, and has received consulting fees from Merck, Gilead Sciences, ViiV Healthcare, Janssen Pharmaceuticals, GlaxoSmithKline, Johnson and Johnson, and Novartis. RWS has received honoraria for participation in advisory boards from Gilead Sciences and GlaxoSmithKline and speaking honoraria from Gilead Sciences and ViiV Healthcare.

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Auteurs

Seth C Inzaule (SC)

Amsterdam Institute for Global Health and Development, and Department of Global Health, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.

Mark J Siedner (MJ)

Department of Medicine, Harvard Medical School, Boston, Massachusetts, United States of America.

Susan J Little (SJ)

Division of Infectious Diseases and Global Public Health, Department of Medicine, University of California San Diego, San Diego, California, United States of America.

Santiago Avila-Rios (S)

Centre for Research in Infectious Diseases, National Institute of Respiratory Diseases, Mexico City, Mexico.

Alisen Ayitewala (A)

National Health Laboratories and Diagnostic Services, Ministries of Health, Kampala, Uganda.

Ronald J Bosch (RJ)

Center for Biostatistics in AIDS Research, Harvard TH Chan School of Public Health, Boston, Massachusetts, United States of America.

Vincent Calvez (V)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique (iPLESP), AP-HP, Hôpital Pitié-Salpêtrière, Service de Virologie, Paris, France.

Francesca Ceccherini-Silberstein (F)

Department of Experimental Medicine, University of Rome Tor Vergata, Rome, Italy.

Charlotte Charpentier (C)

Service de Virologie, Université Paris Cité, INSERM, IAME, UMR 1137, AP-HP, Hôpital Bichat-Claude Bernard, F-75018 Paris, France.

Diane Descamps (D)

Service de Virologie, Université Paris Cité, INSERM, IAME, UMR 1137, AP-HP, Hôpital Bichat-Claude Bernard, F-75018 Paris, France.

Susan H Eshleman (SH)

Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America.

Joseph Fokam (J)

Virology Laboratory, Chantal BIYA International Reference Centre for Research on HIV/AIDS Prevention and Management, Yaoundé, Cameroon, and Faculty of Health Sciences, University of Buea, Yaoundé, Cameroon.

Lisa M Frenkel (LM)

Department of Pediatrics, University of Washington, Seattle, Washington, United States of America.

Ravindra K Gupta (RK)

Cambridge Institute of Therapeutic Immunology and Infectious Diseases, University of Cambridge, Cambridge, United Kingdom.

John P A Ioannidis (JPA)

Department of Medicine, Department of Epidemiology and Population Health, and Meta-Research Innovation Center at Stanford (METRICS), Stanford University, Stanford, California, United States of America.

Pontiano Kaleebu (P)

Medical Research Council/Uganda Virus Research Institute and London School of Hygiene and Tropical Medicine, Entebbe, Uganda.

Rami Kantor (R)

Department of Medicine, Brown University, The Miriam Hospital, Providence, Rhode Island, United States of America.

Seble G Kassaye (SG)

Department of Medicine, Division of Infectious Diseases, Georgetown University, Washington DC, United States of America.

Sergei L Kosakovsky Pond (SL)

Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, Pennsylvania, United States of America.

Vinie Kouamou (V)

Faculty of Medicine and Health Sciences, University of Zimbabwe, Harare, Zimbabwe.

Roger D Kouyos (RD)

Department of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, Zurich, Switzerland and Institute of Medical Virology, University of Zurich, Zurich, Switzerland.

Daniel R Kuritzkes (DR)

Division of Infectious Diseases, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America.

Richard Lessells (R)

Affiliation is KwaZulu-Natal Research Innovation & Sequencing Platform, University of KwaZulu-Natal, Durban, South Africa.

Anne-Genevieve Marcelin (AG)

Sorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, AP-HP, Hôpitaux Universitaires Pitié-Salpêtrière-Charles Foix, Laboratoire de Virologie, Paris, France.

Lawrence Mbuagbaw (L)

Department of Health Research Methods, Evidence, and Impact, McMaster University, Hamilton, Canada.

Brian Minalga (B)

Office of HIV/AIDS Network Coordination, Fred Hutchinson Cancer Center, Seattle, Washington, United States of America.

Nicaise Ndembi (N)

Institute of Human Virology Nigeria, Herbert Macaulay Way, Abuja, Nigeria.

Richard A Neher (RA)

Biozentrum, University of Basel, Basel, Switzerland.

Roger Paredes (R)

Department of Infectious Diseases & irsiCaixa, Hospital Universitari Germans Trias i Pujol, Badalona, Catalonia, Spain.

Deenan Pillay (D)

Division of Infection and Immunity, University College London, London, United Kingdom.

Elliot G Raizes (EG)

United States Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.

Soo-Yon Rhee (SY)

Division of Infectious Diseases, Department of Medicine, Stanford University, Stanford, California, United States of America.

Douglas D Richman (DD)

Center for AIDS Research, Department of Medicine, University of California San Diego, San Diego, California, United States of America.

Kiat Ruxrungtham (K)

School of Global Health, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.

Pardis C Sabeti (PC)

Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.

Jonathan M Schapiro (JM)

National Hemophilia Center, Sheba Medical Center, Ramat Gan, Israel.

Sunee Sirivichayakul (S)

Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.

Kim Steegen (K)

Department of Molecular Medicine and Haematology, National Health Laboratory Service, Johannesburg, South Africa.

Wataru Sugiura (W)

Center for Clinical Sciences, National Center for Global Health and Medicine, Tokyo, Japan.

Gert U van Zyl (GU)

Division of Medical Virology, Stellenbosch University and National Health Laboratory Service, Cape Town, South Africa.

Anne-Mieke Vandamme (AM)

KU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Leuven, Belgium.
Center for Global Health And Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisbon, Portugal.

Annemarie M J Wensing (AMJ)

University Medical Center Utrecht, the Netherlands and Wits Reproductive Health and HIV Institute, University of the Witwatersrand, Johannesburg, South Africa.

Joel O Wertheim (JO)

Department of Medicine, University of California San Diego, San Diego, La Jolla, California, United States of America.

Huldrych F Gunthard (HF)

Department of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, Zurich, Switzerland and Institute of Medical Virology, University of Zurich, Zurich, Switzerland.

Michael R Jordan (MR)

Department of Medicine, Tufts University School of Medicine, Boston, Massachusetts, United States of America.

Robert W Shafer (RW)

Division of Infectious Diseases, Department of Medicine, Stanford University, Stanford, California, United States of America.

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Classifications MeSH