RBPome identification in egg-cell like callus of
Arabidopsis
RKD2-callus
RNA binding domains (RBD)
RNA binding protein (RBP)
RNA interactome capture (RIC)
egg cell
Journal
Biological chemistry
ISSN: 1437-4315
Titre abrégé: Biol Chem
Pays: Germany
ID NLM: 9700112
Informations de publication
Date de publication:
26 10 2023
26 10 2023
Historique:
received:
29
04
2023
accepted:
11
09
2023
medline:
9
11
2023
pubmed:
28
9
2023
entrez:
28
9
2023
Statut:
epublish
Résumé
RNA binding proteins (RBPs) have multiple and essential roles in transcriptional and posttranscriptional regulation of gene expression in all living organisms. Their biochemical identification in the proteome of a given cell or tissue requires significant protein amounts, which limits studies in rare and highly specialized cells. As a consequence, we know almost nothing about the role(s) of RBPs in reproductive processes such as egg cell development, fertilization and early embryogenesis in flowering plants. To systematically identify the RBPome of egg cells in the model plant Arabidopsis, we performed RNA interactome capture (RIC) experiments using the egg cell-like RKD2-callus and were able to identify 728 proteins associated with poly(A
Identifiants
pubmed: 37768858
pii: hsz-2023-0195
doi: 10.1515/hsz-2023-0195
doi:
Substances chimiques
RNA-Binding Proteins
0
RNA
63231-63-0
Proteome
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
1137-1149Informations de copyright
© 2023 the author(s), published by De Gruyter, Berlin/Boston.
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