An Adaptive Generalized Leaky Integrate-and-Fire Model for Hippocampal CA1 Pyramidal Neurons and Interneurons.
CA1 pyramidal neurons and interneurons
Constant and piecewise constant stimulations
Generalized leaky integrate-and-fire models
Hippocampus
Neuron firing properties
Neuronal modeling
Journal
Bulletin of mathematical biology
ISSN: 1522-9602
Titre abrégé: Bull Math Biol
Pays: United States
ID NLM: 0401404
Informations de publication
Date de publication:
04 10 2023
04 10 2023
Historique:
received:
11
01
2023
accepted:
24
08
2023
medline:
5
10
2023
pubmed:
4
10
2023
entrez:
4
10
2023
Statut:
epublish
Résumé
Full-scale morphologically and biophysically realistic model networks, aiming at modeling multiple brain areas, provide an invaluable tool to make significant scientific advances from in-silico experiments on cognitive functions to digital twin implementations. Due to the current technical limitations of supercomputer systems in terms of computational power and memory requirements, these networks must be implemented using (at least) simplified neurons. A class of models which achieve a reasonable compromise between accuracy and computational efficiency is given by generalized leaky integrate-and fire models complemented by suitable initial and update conditions. However, we found that these models cannot reproduce the complex and highly variable firing dynamics exhibited by neurons in several brain regions, such as the hippocampus. In this work, we propose an adaptive generalized leaky integrate-and-fire model for hippocampal CA1 neurons and interneurons, in which the nonlinear nature of the firing dynamics is successfully reproduced by linear ordinary differential equations equipped with nonlinear and more realistic initial and update conditions after each spike event, which strictly depends on the external stimulation current. A mathematical analysis of the equilibria stability as well as the monotonicity properties of the analytical solution for the membrane potential allowed (i) to determine general constraints on model parameters, reducing the computational cost of an optimization procedure based on spike times in response to a set of constant currents injections; (ii) to identify additional constraints to quantitatively reproduce and predict the experimental traces from 85 neurons and interneurons in response to any stimulation protocol using constant and piecewise constant current injections. Finally, this approach allows to easily implement a procedure to create infinite copies of neurons with mathematically controlled firing properties, statistically indistinguishable from experiments, to better reproduce the full range and variability of the firing scenarios observed in a real network.
Identifiants
pubmed: 37792146
doi: 10.1007/s11538-023-01206-8
pii: 10.1007/s11538-023-01206-8
pmc: PMC10550887
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
109Informations de copyright
© 2023. The Author(s).
Références
Neuroscience. 2011 Mar 17;177:252-68
pubmed: 21215795
PLoS Comput Biol. 2018 Sep 17;14(9):e1006423
pubmed: 30222740
Biol Cybern. 2008 Nov;99(4-5):417-26
pubmed: 19011928
Front Neuroinform. 2018 Dec 03;12:88
pubmed: 30559658
Nat Commun. 2018 Feb 19;9(1):709
pubmed: 29459723
Neuroinformatics. 2023 Jan;21(1):101-113
pubmed: 35986836
SIAM J Appl Dyn Syst. 2013 Sep 10;12(3):1474-1514
pubmed: 24489486
IEEE Trans Neural Netw. 2004 Sep;15(5):1063-70
pubmed: 15484883
Front Comput Neurosci. 2019 Jun 06;13:35
pubmed: 31244635
J Comput Neurosci. 2012 Oct;33(2):207-25
pubmed: 22310969
J Neurophysiol. 2006 Oct;96(4):1912-26
pubmed: 16807352
Int J Neural Syst. 2014 Aug;24(5):1440004
pubmed: 24875788
Science. 2009 Oct 16;326(5951):379-80
pubmed: 19833951
Front Comput Neurosci. 2009 Jul 30;3:9
pubmed: 19668702
Neural Comput. 2021 Jan;33(1):41-66
pubmed: 33253029
Biol Cybern. 2007 Dec;97(5-6):337-9
pubmed: 17968583
J Neurophysiol. 2005 Nov;94(5):3637-42
pubmed: 16014787
Neural Comput. 1997 Aug 15;9(6):1179-209
pubmed: 9248061
IEEE Trans Neural Netw. 2003;14(6):1569-72
pubmed: 18244602
J Neurosci. 2010 May 5;30(18):6434-42
pubmed: 20445069