Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
20 10 2023
Historique:
received: 25 05 2023
accepted: 11 10 2023
medline: 1 11 2023
pubmed: 21 10 2023
entrez: 20 10 2023
Statut: epublish

Résumé

Mammalian lactate dehydrogenase D (LDHD) catalyzes the oxidation of D-lactate to pyruvate. LDHD mutations identified in patients with D-lactic acidosis lead to deficient LDHD activity. Here, we perform a systematic biochemical study of mouse LDHD (mLDHD) and determine the crystal structures of mLDHD in FAD-bound form and in complexes with FAD, Mn

Identifiants

pubmed: 37863926
doi: 10.1038/s41467-023-42456-3
pii: 10.1038/s41467-023-42456-3
pmc: PMC10589216
doi:

Substances chimiques

Lactate Dehydrogenases EC 1.1.-
Lactic Acid 33X04XA5AT
Hydroxy Acids 0
L-Lactate Dehydrogenase EC 1.1.1.27

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

6638

Informations de copyright

© 2023. Springer Nature Limited.

Références

Int J Mol Sci. 2019 Apr 27;20(9):
pubmed: 31035592
Mol Gen Genet. 1993 Apr;238(3):315-24
pubmed: 8492799
J Comput Chem. 2007 Apr 30;28(6):1145-52
pubmed: 17274016
IUBMB Life. 2008 Sep;60(9):605-8
pubmed: 18506840
J Mol Biol. 2002 Apr 19;318(1):109-19
pubmed: 12054772
N Engl J Med. 1979 Aug 2;301(5):249-52
pubmed: 449991
Arch Biochem Biophys. 2017 Oct 15;632:104-117
pubmed: 28669855
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21
pubmed: 20124702
Nat Rev Clin Oncol. 2022 Dec;19(12):749-762
pubmed: 36207413
J Mol Biol. 2000 Jan 14;295(2):357-74
pubmed: 10623531
Nat Commun. 2019 Apr 1;10(1):1477
pubmed: 30931947
Protein Sci. 2020 Jan;29(1):128-140
pubmed: 31606894
Front Mol Biosci. 2022 Aug 11;9:949563
pubmed: 36032669
Biochim Biophys Acta. 2004 Feb 15;1608(2-3):104-13
pubmed: 14871487
Biochem Biophys Res Commun. 2002 Jul 26;295(4):910-6
pubmed: 12127981
Front Neurosci. 2015 Feb 27;9:22
pubmed: 25774123
Biochemistry. 2018 Sep 18;57(37):5388-5406
pubmed: 30149697
Mol Gen Genet. 1994 Sep 28;244(6):622-9
pubmed: 7969031
Nat Med. 2016 Apr;22(4):421-6
pubmed: 26950361
J Nutr. 2005 Jul;135(7):1619-25
pubmed: 15987839
Medicine (Baltimore). 1998 Mar;77(2):73-82
pubmed: 9556700
Biochem J. 2002 Jul 15;365(Pt 2):391-403
pubmed: 11955284
Elife. 2022 Jun 24;11:
pubmed: 35748623
J Mol Evol. 2009 Sep;69(3):276-87
pubmed: 19727923
Acta Pharm Sin B. 2022 May;12(5):2348-2357
pubmed: 35646544
Methods Enzymol. 1997;276:307-26
pubmed: 27754618
J Gastrointest Surg. 2003 Dec;7(8):1069-72
pubmed: 14675717
Science. 1963 Feb 15;139(3555):601-2
pubmed: 17788300
Environ Microbiol. 2015 Mar;17(3):670-7
pubmed: 24762045
Science. 1966 May 27;152(3726):1272-3
pubmed: 4287062
J Clin Invest. 2019 Dec 2;129(12):5163-5168
pubmed: 31638601
FEBS Lett. 2013 Mar 1;587(5):467-73
pubmed: 23333299
Curr Opin Chem Biol. 2006 Oct;10(5):492-7
pubmed: 16935022
Arch Intern Med. 1984 Feb;144(2):357-60
pubmed: 6696574
Biochemistry. 1979 Oct 16;18(21):4714-24
pubmed: 497162
Oncol Lett. 2018 Jul;16(1):866-874
pubmed: 29963157
Proteins. 2002 May 15;47(3):393-402
pubmed: 11948792
J Biol Chem. 1991 Jul 5;266(19):12588-94
pubmed: 1840590
Biochemistry. 2011 May 31;50(21):4402-10
pubmed: 21506553
JIMD Rep. 2021 May 21;60(1):15-22
pubmed: 34258137
mBio. 2020 Sep 22;11(5):
pubmed: 32963009
J Lipid Res. 2012 Jul;53(7):1327-35
pubmed: 22517924
Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9413-8
pubmed: 10944213
J Biol Chem. 2015 Dec 11;290(50):29820-33
pubmed: 26515067
Comput Math Methods Med. 2022 Sep 15;2022:7102736
pubmed: 36158120
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
pubmed: 15572765
Biochim Biophys Acta. 1972 May 25;267(2):227-37
pubmed: 4557653
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32
pubmed: 20124692
Biochemistry. 1973 Jun 19;12(13):2468-74
pubmed: 4575624
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):293-302
pubmed: 21460447
N Engl J Med. 2014 Dec 11;371(24):2309-19
pubmed: 25494270
J Lipid Res. 2006 Dec;47(12):2772-80
pubmed: 16998236
BMC Evol Biol. 2008 Oct 01;8:268
pubmed: 18828920
Clin Biochem. 2008 Sep;41(13):1099-103
pubmed: 18638467
J Androl. 2010 Jan-Feb;31(1):86-94
pubmed: 19875487
Kidney Int. 1996 Jan;49(1):1-8
pubmed: 8770942
Z Gastroenterol. 2017 Jan;55(1):75-82
pubmed: 27723911
Res Exp Med (Berl). 1992;192(6):407-14
pubmed: 1480818
Yeast. 1999 Sep 30;15(13):1377-91
pubmed: 10509019
J Bacteriol. 1999 Dec;181(24):7580-7
pubmed: 10601217
Toxicol Lett. 1999 Nov 22;110(3):145-75
pubmed: 10597025
Cell Discov. 2021 Jan 12;7(1):3
pubmed: 33431826
Science. 1963 Jun 21;140(3573):1329-30
pubmed: 17802174
Gastroenterol Res Pract. 2015;2015:476215
pubmed: 25977687
J Biol Chem. 2009 Sep 11;284(37):25026-37
pubmed: 19586914
Annu Rev Physiol. 2019 Feb 10;81:139-164
pubmed: 30485760

Auteurs

Shan Jin (S)

State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yue-Yang Road, Shanghai, 200031, China.

Xingchen Chen (X)

State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yue-Yang Road, Shanghai, 200031, China.

Jun Yang (J)

State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yue-Yang Road, Shanghai, 200031, China.

Jianping Ding (J)

State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yue-Yang Road, Shanghai, 200031, China. jpding@sibcb.ac.cn.
School of Life Science and Technology, ShanghaiTech University, 393 Middle Huaxia Road, Shanghai, 201210, China. jpding@sibcb.ac.cn.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH