Planktonic microbial signatures of sinking particle export in the open ocean's interior.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
07 11 2023
Historique:
received: 28 06 2023
accepted: 25 10 2023
medline: 9 11 2023
pubmed: 8 11 2023
entrez: 7 11 2023
Statut: epublish

Résumé

A considerable amount of particulate carbon produced by oceanic photosynthesis is exported to the deep-sea by the "gravitational pump" (~6.8 to 7.7 Pg C/year), sequestering it from the atmosphere for centuries. How particulate organic carbon (POC) is transformed during export to the deep sea however is not well understood. Here, we report that dominant suspended prokaryotes also found in sinking particles serve as informative tracers of particle export processes. In a three-year time series from oceanographic campaigns in the Pacific Ocean, upper water column relative abundances of suspended prokaryotes entrained in sinking particles decreased exponentially from depths of 75 to 250 m, conforming to known depth-attenuation patterns of carbon, energy, and mass fluxes in the epipelagic zone. Below ~250 m however, the relative abundance of suspended prokaryotes entrained in sinking particles increased with depth. These results indicate that microbial entrainment, colonization, and sinking particle formation are elevated at mesopelagic and bathypelagic depths. Comparison of suspended and sinking particle-associated microbes provides information about the depth-variability of POC export and biotic processes, that is not evident from biogeochemical data alone.

Identifiants

pubmed: 37935690
doi: 10.1038/s41467-023-42909-9
pii: 10.1038/s41467-023-42909-9
pmc: PMC10630432
doi:

Substances chimiques

Carbon 7440-44-0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

7177

Informations de copyright

© 2023. The Author(s).

Références

Environ Microbiol. 2016 May;18(5):1403-14
pubmed: 26271760
Nat Rev Microbiol. 2014 Oct;12(10):699-713
pubmed: 25157695
Mol Ecol. 2020 May;29(10):1820-1838
pubmed: 32323882
ISME J. 2016 Jun;10(6):1308-22
pubmed: 26645474
Front Microbiol. 2021 Sep 13;12:610675
pubmed: 34589060
Proc Natl Acad Sci U S A. 2019 Jun 11;116(24):11824-11832
pubmed: 31127042
Environ Microbiol Rep. 2019 Jun;11(3):386-400
pubmed: 30246414
Science. 2007 Apr 27;316(5824):567-70
pubmed: 17463282
Sci Adv. 2020 Apr 15;6(16):eaaz4354
pubmed: 32494615
Commun Biol. 2021 May 21;4(1):604
pubmed: 34021239
mSphere. 2022 Apr 27;7(2):e0003222
pubmed: 35306867
Science. 2011 Sep 2;333(6047):1296-300
pubmed: 21885783
Front Microbiol. 2015 May 19;6:469
pubmed: 26042105
Proc Natl Acad Sci U S A. 2021 Jan 26;118(4):
pubmed: 33479184
Nature. 2019 Apr;568(7752):327-335
pubmed: 30996317
mSystems. 2021 May 4;6(3):
pubmed: 33947808
ISME J. 2022 Jun;16(6):1627-1635
pubmed: 35236926
Nat Methods. 2016 Jul;13(7):581-3
pubmed: 27214047
Front Microbiol. 2019 Oct 01;10:2273
pubmed: 31632377
ISME Commun. 2021 Apr 14;1(1):11
pubmed: 36721065
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
ISME J. 2022 Aug;16(8):1896-1906
pubmed: 35444263
Microbiome. 2018 Aug 9;6(1):140
pubmed: 30092815
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
BMC Genomics. 2020 Oct 6;21(1):692
pubmed: 33023469
Nat Commun. 2019 Apr 26;10(1):1895
pubmed: 31028256
Appl Environ Microbiol. 1984 Apr;47(4):835-42
pubmed: 16346522
Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):1842-9
pubmed: 22308450
mBio. 2022 Aug 30;13(4):e0156922
pubmed: 35862780
Science. 2007 Feb 9;315(5813):838-40
pubmed: 17289995
Ann Rev Mar Sci. 2019 Jan 3;11:57-74
pubmed: 29996063
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
ISME J. 2015 Mar;9(3):782-92
pubmed: 25290506
Science. 2014 Jul 11;345(6193):207-12
pubmed: 25013074
Sci Robot. 2021 Jan 13;6(50):
pubmed: 34043577

Auteurs

Fuyan Li (F)

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai'i at Mānoa, Honolulu, HI, USA.

Andrew Burger (A)

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai'i at Mānoa, Honolulu, HI, USA.

John M Eppley (JM)

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai'i at Mānoa, Honolulu, HI, USA.

Kirsten E Poff (KE)

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai'i at Mānoa, Honolulu, HI, USA.
McDonogh School, Owings Mills, MD, USA.

David M Karl (DM)

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai'i at Mānoa, Honolulu, HI, USA.

Edward F DeLong (EF)

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, HI, USA. edelong@hawaii.edu.
Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai'i at Mānoa, Honolulu, HI, USA. edelong@hawaii.edu.

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