Global biogeography of the smallest plankton across ocean depths.
Journal
Science advances
ISSN: 2375-2548
Titre abrégé: Sci Adv
Pays: United States
ID NLM: 101653440
Informations de publication
Date de publication:
10 11 2023
10 11 2023
Historique:
medline:
10
11
2023
pubmed:
8
11
2023
entrez:
8
11
2023
Statut:
ppublish
Résumé
Tiny ocean plankton (picoplankton) are fundamental for the functioning of the biosphere, but the ecological mechanisms shaping their biogeography were partially understood. Comprehending whether these microorganisms are structured by niche versus neutral processes is relevant in the context of global change. We investigate the ecological processes (selection, dispersal, and drift) structuring global-ocean picoplanktonic communities inhabiting the epipelagic (0 to 200 meters), mesopelagic (200 to 1000 meters), and bathypelagic (1000 to 4000 meters) zones. We found that selection decreased, while dispersal limitation increased with depth, possibly due to differences in habitat heterogeneity and dispersal barriers such as water masses and bottom topography. Picoplankton β-diversity positively correlated with environmental heterogeneity and water mass variability, but this relationship tended to be weaker for eukaryotes than for prokaryotes. Community patterns were more pronounced in the Mediterranean Sea, probably because of its cross-basin environmental heterogeneity and deep-water isolation. We conclude that different combinations of ecological mechanisms shape the biogeography of the ocean microbiome across depths.
Identifiants
pubmed: 37939185
doi: 10.1126/sciadv.adg9763
pmc: PMC10631730
doi:
Substances chimiques
Water
059QF0KO0R
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
eadg9763Références
ISME J. 2021 Jan;15(1):55-66
pubmed: 32855435
Microbiol Rev. 1987 Jun;51(2):221-71
pubmed: 2439888
ISME J. 2020 Dec;14(12):2951-2966
pubmed: 32719401
Science. 2015 May 22;348(6237):1261359
pubmed: 25999513
Trends Ecol Evol. 2011 Jul;26(7):340-8
pubmed: 21561679
Environ Microbiol. 2016 May;18(5):1403-14
pubmed: 26271760
Sci Adv. 2021 Aug 27;7(35):
pubmed: 34452910
Commun Biol. 2023 Jan 18;6(1):64
pubmed: 36653511
Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17633-8
pubmed: 23045668
Microbiome. 2020 Apr 20;8(1):55
pubmed: 32312331
ISME J. 2023 Jan;17(1):59-69
pubmed: 36202927
Global Biogeochem Cycles. 2021 Apr;35(4):e2020GB006759
pubmed: 35860208
Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20344-9
pubmed: 19075222
Mol Ecol. 2010 Mar;19 Suppl 1:21-31
pubmed: 20331767
PLoS One. 2016 Mar 16;11(3):e0151699
pubmed: 26982180
Microbiol Spectr. 2022 Feb 23;10(1):e0079821
pubmed: 35019678
Nat Methods. 2016 Jul;13(7):581-3
pubmed: 27214047
Appl Environ Microbiol. 2009 Dec;75(23):7537-41
pubmed: 19801464
ISME J. 2022 Jan;16(1):178-189
pubmed: 34285363
ISME J. 2020 Feb;14(2):437-449
pubmed: 31645670
Bioinformatics. 2010 Jun 1;26(11):1463-4
pubmed: 20395285
ISME J. 2019 Jul;13(7):1865-1877
pubmed: 30886318
Mol Ecol. 2019 Apr;28(8):1930-1945
pubmed: 30663830
Proc Natl Acad Sci U S A. 2018 Jul 17;115(29):E6799-E6807
pubmed: 29967136
Syst Appl Microbiol. 2021 Jul;44(4):126227
pubmed: 34252729
Water Res. 2022 May 15;215:118274
pubmed: 35298994
Sci Adv. 2022 Feb 4;8(5):eabj9309
pubmed: 35119936
Cell. 2019 Dec 12;179(7):1451-1454
pubmed: 31835026
Proc Natl Acad Sci U S A. 2021 Mar 9;118(10):
pubmed: 33649201
ISME J. 2022 Dec;16(12):2653-2665
pubmed: 36115923
Appl Environ Microbiol. 2007 Aug;73(16):5261-7
pubmed: 17586664
ISME J. 2009 Dec;3(12):1374-86
pubmed: 19626056
Environ Microbiol. 2022 May;24(5):2222-2238
pubmed: 35084095
ISME J. 2010 Apr;4(4):564-76
pubmed: 20010630
Sci Rep. 2020 Feb 12;10(1):2455
pubmed: 32051469
Nat Commun. 2015 Mar 04;6:6521
pubmed: 25735516
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Front Microbiol. 2016 Dec 16;7:1949
pubmed: 28123379
ISME J. 2022 Jan;16(1):159-167
pubmed: 34282284
Microbiol Mol Biol Rev. 2013 Sep;77(3):342-56
pubmed: 24006468
Nat Commun. 2016 Apr 19;7:11239
pubmed: 27093522
ISME J. 2016 Nov;10(11):2582-2592
pubmed: 27128994
Environ Microbiol Rep. 2018 Apr;10(2):184-189
pubmed: 29377623
Science. 2008 May 23;320(5879):1034-9
pubmed: 18497287
Nat Rev Microbiol. 2020 Mar;18(3):139-151
pubmed: 31937947
Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1326-32
pubmed: 25733885
Environ Microbiol. 2016 Dec;18(12):4378-4390
pubmed: 27059603
Nat Commun. 2018 Jan 10;9(1):142
pubmed: 29321528
Mol Ecol. 2015 Nov;24(22):5692-706
pubmed: 26462173
Philos Trans R Soc Lond B Biol Sci. 2011 Aug 27;366(1576):2351-63
pubmed: 21768151
Nat Rev Microbiol. 2012 May 14;10(7):497-506
pubmed: 22580365
Science. 2015 May 22;348(6237):1261605
pubmed: 25999516
Bioinformatics. 2009 Aug 1;25(15):1972-3
pubmed: 19505945
Appl Environ Microbiol. 1997 Jan;63(1):50-6
pubmed: 8979338
Proc Natl Acad Sci U S A. 2018 Aug 28;115(35):E8266-E8275
pubmed: 30108147
Environ Microbiol. 2013 May;15(5):1254-61
pubmed: 23206217
Commun Biol. 2021 May 21;4(1):604
pubmed: 34021239
Ecol Lett. 2012 Jul;15(7):740-7
pubmed: 22583795
PLoS One. 2013 Sep 03;8(9):e73051
pubmed: 24019892
Nat Commun. 2017 Aug 4;8(1):201
pubmed: 28779070
Curr Biol. 2017 Jun 5;27(11):R470-R473
pubmed: 28586681
Philos Trans R Soc Lond B Biol Sci. 2020 May 11;375(1798):20190243
pubmed: 32200741
Science. 2015 May 22;348(6237):1261447
pubmed: 25999514
Mol Ecol. 2014 Feb;23(4):954-64
pubmed: 24460915
Annu Rev Microbiol. 2011;65:91-110
pubmed: 21639789
Mol Ecol. 2011 Jan;20(2):258-74
pubmed: 21143328
Environ Microbiol. 2018 Jun;20(6):2231-2240
pubmed: 29727053
Ann Rev Mar Sci. 2023 Jan 16;15:461-483
pubmed: 35834811
Microbiol Mol Biol Rev. 2017 Oct 11;81(4):
pubmed: 29021219
Environ Microbiol. 2022 Apr;24(4):1746-1759
pubmed: 34921709
ISME J. 2016 Mar;10(3):596-608
pubmed: 26251871
Sci Adv. 2022 Aug 26;8(34):eabn3485
pubmed: 36026445
Elife. 2022 Aug 03;11:
pubmed: 35920817
Nucleic Acids Res. 2013 Jan;41(Database issue):D597-604
pubmed: 23193267
Ecol Lett. 2009 Jul;12(7):693-715
pubmed: 19473217
Science. 2014 Sep 12;345(6202):1346-9
pubmed: 25214628
Nature. 2016 Apr 28;532(7600):465-470
pubmed: 26863193
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712
Mol Biol Evol. 2009 Jul;26(7):1641-50
pubmed: 19377059
ISME J. 2013 Nov;7(11):2069-79
pubmed: 23739053
Mol Biol Evol. 2010 Feb;27(2):221-4
pubmed: 19854763