The carbonyl-lock mechanism underlying non-aromatic fluorescence in biological matter.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
13 11 2023
Historique:
received: 23 11 2022
accepted: 24 10 2023
medline: 15 11 2023
pubmed: 14 11 2023
entrez: 13 11 2023
Statut: epublish

Résumé

Challenging the basis of our chemical intuition, recent experimental evidence reveals the presence of a new type of intrinsic fluorescence in biomolecules that exists even in the absence of aromatic or electronically conjugated chemical compounds. The origin of this phenomenon has remained elusive so far. In the present study, we identify a mechanism underlying this new type of fluorescence in different biological aggregates. By employing non-adiabatic ab initio molecular dynamics simulations combined with a data-driven approach, we characterize the typical ultrafast non-radiative relaxation pathways active in non-fluorescent peptides. We show that the key vibrational mode for the non-radiative decay towards the ground state is the carbonyl elongation. Non-aromatic fluorescence appears to emerge from blocking this mode with strong local interactions such as hydrogen bonds. While we cannot rule out the existence of alternative non-aromatic fluorescence mechanisms in other systems, we demonstrate that this carbonyl-lock mechanism for trapping the excited state leads to the fluorescence yield increase observed experimentally, and set the stage for design principles to realize novel non-invasive biocompatible probes with applications in bioimaging, sensing, and biophotonics.

Identifiants

pubmed: 37957206
doi: 10.1038/s41467-023-42874-3
pii: 10.1038/s41467-023-42874-3
pmc: PMC10643446
doi:

Substances chimiques

Peptides 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

7325

Informations de copyright

© 2023. The Author(s).

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Auteurs

Gonzalo Díaz Mirón (GD)

Departamento de Química Inorgánica, Analítica y Química Física, Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.

Jonathan A Semelak (JA)

Departamento de Química Inorgánica, Analítica y Química Física, Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.

Luca Grisanti (L)

Division of Theoretical Physics, Ruder Bošković Institute, Zagreb, Croatia.

Alex Rodriguez (A)

Condensed Matter and Statistical Physics, The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy.

Irene Conti (I)

Dipartimento di Chimica industriale "Toso Montanari", Università di Bologna, Bologna, Italy.

Martina Stella (M)

Condensed Matter and Statistical Physics, The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy.

Jayaramakrishnan Velusamy (J)

Chemical Engineering and Biotechnology, University of Cambridge, Cambridge, UK.

Nicola Seriani (N)

Condensed Matter and Statistical Physics, The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy.

Nadja Došlić (N)

Division of Theoretical Physics, Ruder Bošković Institute, Zagreb, Croatia.

Ivan Rivalta (I)

Dipartimento di Chimica industriale "Toso Montanari", Università di Bologna, Bologna, Italy.
ENSL, CNRS, Lyon, France.

Marco Garavelli (M)

Dipartimento di Chimica industriale "Toso Montanari", Università di Bologna, Bologna, Italy.

Dario A Estrin (DA)

Departamento de Química Inorgánica, Analítica y Química Física, Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.

Gabriele S Kaminski Schierle (GS)

Chemical Engineering and Biotechnology, University of Cambridge, Cambridge, UK.

Mariano C González Lebrero (MC)

Departamento de Química Inorgánica, Analítica y Química Física, Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.

Ali Hassanali (A)

Condensed Matter and Statistical Physics, The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy. ahassana@ictp.it.

Uriel N Morzan (UN)

Condensed Matter and Statistical Physics, The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy. umorzan@ictp.it.

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Classifications MeSH