Connecting the multiple dimensions of global soil fungal diversity.


Journal

Science advances
ISSN: 2375-2548
Titre abrégé: Sci Adv
Pays: United States
ID NLM: 101653440

Informations de publication

Date de publication:
12 2023
Historique:
medline: 1 12 2023
pubmed: 29 11 2023
entrez: 29 11 2023
Statut: ppublish

Résumé

How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering the management of this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate the distributions and drivers of different levels of taxonomic and phylogenetic diversity of fungi and their ecological groups. We show the impact of precipitation and temperature interactions on local fungal species richness (alpha diversity) across different climates. Our findings reveal how temperature drives fungal compositional turnover (beta diversity) and phylogenetic diversity, linking them with regional species richness (gamma diversity). We integrate fungi into the principles of global biodiversity distribution and present detailed maps for biodiversity conservation and modeling of global ecological processes.

Identifiants

pubmed: 38019923
doi: 10.1126/sciadv.adj8016
pmc: PMC10686567
doi:

Substances chimiques

Soil 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

eadj8016

Références

PeerJ. 2020 Aug 03;8:e9593
pubmed: 32832266
Science. 2019 Oct 25;366(6464):480-485
pubmed: 31649197
Science. 2019 Sep 13;365(6458):1114-1119
pubmed: 31515384
Nat Commun. 2019 May 30;10(1):2369
pubmed: 31147554
Proc Natl Acad Sci U S A. 2015 Dec 22;112(51):15684-9
pubmed: 26647180
Biometrics. 2006 Mar;62(1):245-53
pubmed: 16542252
MycoKeys. 2023 Apr 10;96:143-157
pubmed: 37214179
Sci Rep. 2019 Apr 23;9(1):6443
pubmed: 31015512
Science. 2020 Feb 21;367(6480):
pubmed: 32079744
Proc Natl Acad Sci U S A. 2008 Aug 12;105 Suppl 1:11556-63
pubmed: 18695230
Trends Ecol Evol. 2016 Jan;31(1):67-80
pubmed: 26701706
Mycorrhiza. 2022 Mar;32(2):135-144
pubmed: 35138435
Nature. 2022 Oct;610(7933):693-698
pubmed: 36224389
Nat Commun. 2020 Aug 3;11(1):3870
pubmed: 32747621
Nat Commun. 2023 Jun 8;14(1):3311
pubmed: 37291086
Philos Trans R Soc Lond B Biol Sci. 2015 Feb 19;370(1662):20140007
pubmed: 25561668
Nat Commun. 2019 Nov 7;10(1):5077
pubmed: 31700000
Philos Trans R Soc Lond B Biol Sci. 2005 Oct 29;360(1462):1935-43
pubmed: 16214751
Nucleic Acids Res. 2019 Jan 8;47(D1):D259-D264
pubmed: 30371820
Nat Commun. 2019 Nov 13;10(1):5142
pubmed: 31723140
Nat Commun. 2022 Mar 17;13(1):1430
pubmed: 35301304
Science. 2022 Nov 25;378(6622):915-920
pubmed: 36423285
Nat Microbiol. 2022 May;7(5):607-619
pubmed: 35508719
F1000Res. 2018 Sep 6;7:1418
pubmed: 30416717
Environ Microbiol Rep. 2016 Oct;8(5):774-779
pubmed: 27348848
Sci Data. 2017 Sep 05;4:170122
pubmed: 28872642
Glob Chang Biol. 2022 Nov;28(22):6696-6710
pubmed: 36056462
Mol Ecol. 2012 Sep;21(17):4160-70
pubmed: 22568722
Science. 2013 Jan 4;339(6115):74-8
pubmed: 23258408
Nat Commun. 2022 Sep 1;13(1):4683
pubmed: 36050293
Nature. 2018 Aug;560(7717):233-237
pubmed: 30069051
Sci Data. 2020 Jul 13;7(1):228
pubmed: 32661237
Science. 2018 Jan 19;359(6373):320-325
pubmed: 29348236
Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6241-6
pubmed: 22454494
PeerJ. 2016 Oct 18;4:e2584
pubmed: 27781170
Am Nat. 2007 Mar;169(3):E68-83
pubmed: 17230400
Glob Chang Biol. 2020 Nov;26(11):6616-6629
pubmed: 32311220
Nat Ecol Evol. 2023 Jul;7(7):1002-1011
pubmed: 37169879
Sci Data. 2018 Jan 09;5:170191
pubmed: 29313841
Bioscience. 2017 Jun 1;67(6):534-545
pubmed: 28608869
Mol Plant Pathol. 2012 May;13(4):414-30
pubmed: 22471698
New Phytol. 2023 Feb;237(4):1432-1445
pubmed: 36375492
Mol Ecol. 2012 Sep;21(17):4151-4
pubmed: 22924792
Curr Biol. 2023 Jun 5;33(11):R560-R573
pubmed: 37279689
Evolution. 2015 Aug;69(8):2196-209
pubmed: 26179951
Science. 2014 Nov 28;346(6213):1256688
pubmed: 25430773
Mol Ecol Resour. 2022 Oct;22(7):2793-2809
pubmed: 35621380
New Phytol. 2021 Jul;231(2):763-776
pubmed: 33507570
New Phytol. 2018 Feb;217(3):1370-1385
pubmed: 28906012
Ecol Lett. 2014 Jul;17(7):866-80
pubmed: 24751205
Sci Data. 2020 Nov 16;7(1):398
pubmed: 33199736

Auteurs

Vladimir Mikryukov (V)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Olesya Dulya (O)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Alexander Zizka (A)

Department of Biology, Philipps-University, Marburg 35032, Germany.

Mohammad Bahram (M)

Department of Ecology, Swedish University of Agricultural Sciences, Uppsala 75007, Sweden.

Niloufar Hagh-Doust (N)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Sten Anslan (S)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Oleh Prylutskyi (O)

Department of Mycology and Plant Resistance, School of Biology, V.N. Karazin Kharkiv National University, Kharkiv 61022, Ukraine.

Manuel Delgado-Baquerizo (M)

Laboratorio de Biodiversidad y Funcionamiento Ecosistemico, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), Consejo Superior de Investigaciones Científicas, Sevilla 41012, Spain.

Fernando T Maestre (FT)

Instituto Multidisciplinar para el Estudio del Medio 'Ramón Margalef' and Departamento de Ecología, Universidad de Alicante, Alicante 03690, Spain.

Henrik Nilsson (H)

Gothenburg Global Biodiversity Centre, University of Gothenburg, Gothenburg 40530, Sweden.

Jaan Pärn (J)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Maarja Öpik (M)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Mari Moora (M)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Martin Zobel (M)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Mikk Espenberg (M)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Ülo Mander (Ü)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Abdul Nasir Khalid (AN)

Institute of Botany, University of the Punjab, Pakistan 54590, Pakistan.

Adriana Corrales (A)

Centro de Investigaciones en Microbiología y Biotecnología-UR (CIMBIUR), Universidad del Rosario, Bogotá 111221, Colombia.

Ahto Agan (A)

Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu 51006, Estonia.

Aída-M Vasco-Palacios (AM)

Grupo de BioMicro y Microbiología Ambiental, Escuela de Microbiologia, Universidad de Antioquia UdeA, Medellin 050010, Colombia.

Alessandro Saitta (A)

Department of Agricultural, Food and Forest Sciences, University of Palermo, Palermo 90128, Italy.

Andrea Rinaldi (A)

Department of Biomedical Sciences, University of Cagliari, Cagliari 09124, Italy.

Annemieke Verbeken (A)

Department Biology, Ghent University, Ghent 9000, Belgium.

Bobby Sulistyo (B)

Department Biology, Ghent University, Ghent 9000, Belgium.

Boris Tamgnoue (B)

Department of Crop Science, University of Dschang, Dschang, Cameroon.

Brendan Furneaux (B)

Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä 40014, Finland.

Camila Duarte Ritter (C)

Instituto Juruá, Manaus 69083, Brazil.

Casper Nyamukondiwa (C)

Department of Biological Sciences and Biotechnology, Botswana International University of Science and Technology, Palapye 10071, Botswana.

Cathy Sharp (C)

Natural History Museum of Zimbabwe, Bulawayo, Zimbabwe.

César Marín (C)

Centro de Investigación e Innovación para el Cambio Climático (CiiCC), Universidad SantoTomás, Valdivia, Chile.

Daniyal Gohar (D)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.

Darta Klavina (D)

Latvian State Forest Research Institute Silava, Salaspils 2169, Latvia.

Dipon Sharmah (D)

Department of Botany, Jawaharlal Nehru Rajkeeya Mahavidyalaya, Pondicherry University, Port Blair 744101, India.

Dong-Qin Dai (DQ)

College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China.

Eduardo Nouhra (E)

Instituto Multidisciplinario de Biología Vegetal (CONICET), Universidad Nacional de Córdoba, Cordoba 5000, Argentina.

Elisabeth Machteld Biersma (EM)

Natural History Museum of Denmark, Copenhagen 1123, Denmark.
British Antarctic Survey, NERC, High Cross, Cambridge CB3 0ET, UK.

Elisabeth Rähn (E)

Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu 51006, Estonia.

Erin Cameron (E)

Department of Environmental Science, Saint Mary's University, Halifax B3H 3C3, Canada.

Eske De Crop (E)

Department Biology, Ghent University, Ghent 9000, Belgium.

Eveli Otsing (E)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.

Evgeny Davydov (E)

Altai State University, Barnaul 656049, Russia.

Felipe Albornoz (F)

Land and Water, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Wembley 6014, Australia.

Francis Brearley (F)

Department of Natural Sciences, Manchester Metropolitan University, Manchester M1 5GD, UK.

Franz Buegger (F)

Helmholtz Zentrum München, Neuherberg 85764, Germany.

Geoffrey Zahn (G)

Biology Department, Utah Valley University, Orem, UT 84058, USA.

Gregory Bonito (G)

Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824-6254, USA.

Inga Hiiesalu (I)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Isabel Barrio (I)

Faculty of Natural and Environmental Sciences, Agricultural University of Iceland, Reykjavík 112, Iceland.

Jacob Heilmann-Clausen (J)

Center for Macroecology, Evolution and Climate, University of Copenhagen, Copenhagen 1350, Denmark.

Jelena Ankuda (J)

Vokė branch, Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry (LAMMC), Vilnius LT-02232, Lithuania.

Jiri Doležal (J)

Department of Botany, Faculty of Science, University of South Bohemia, České Budějovice 37005, Czech Republic.

John Kupagme (J)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.

Jose Maciá-Vicente (J)

Department of Environmental Sciences, Plant Ecology and Nature Conservation, Wageningen University and Research, Wageningen 6708, Netherlands.

Joseph Djeugap Fovo (J)

Department of Crop Science, University of Dschang, Dschang, Cameroon.

József Geml (J)

ELKH-EKKE Lendület Environmental Microbiome Research Group, Eszterházy Károly Catholic University, Eger 3300, Hungary.

Juha Alatalo (J)

Environmental Science Center, Qatar University, Doha, Qatar.

Julieta Alvarez-Manjarrez (J)

Instituto de Biología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.

Kadri Põldmaa (K)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.
Natural History Museum, University of Tartu, Tartu 51003, Estonia.

Kadri Runnel (K)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.

Kalev Adamson (K)

Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu 51006, Estonia.

Kari-Anne Bråthen (KA)

Department of Arctic and Marine Biology, The Arctic University of Norway, Tromsø 9019, Norway.

Karin Pritsch (K)

Helmholtz Zentrum München, Neuherberg 85764, Germany.

Kassim Tchan Issifou (K)

Research Unit Tropical Mycology and Plants-Soil Fungi Interactions, University of Parakou, Parakou 00229, Benin.

Kęstutis Armolaitis (K)

Department of Silviculture and Ecology, Institute of Forestry, Lithuanian Research Centre for Agriculture and Forestry (LAMMC), Girionys 53101, Lithuania.

Kevin Hyde (K)

Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.

Kevin K Newsham (KK)

British Antarctic Survey, NERC, High Cross, Cambridge CB3 0ET, UK.

Kristel Panksep (K)

Chair of Hydrobiology and Fishery, Estonian University of Life Sciences, Tartu 51006, Estonia.

Adebola Azeez Lateef (AA)

Department of Plant Biology, Faculty of Life Science, University of Ilorin, Ilorin 240102, Nigeria.
Department of Forest Sciences, University of Helsinki, Helsinki 00014, Finland.

Linda Hansson (L)

Gothenburg Centre for Sustainable Development, Gothenburg 41133, Sweden.

Louis Lamit (L)

Department of Biology, Syracuse University, Syracuse 13244, USA.

Malka Saba (M)

Department of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan.

Maria Tuomi (M)

Department of Arctic and Marine Biology, The Arctic University of Norway, Tromsø 9019, Norway.

Marieka Gryzenhout (M)

Department of Genetics, Faculty of Natural and Agricultural Sciences, University of the Free State, Bloemfontein 9300, South Africa.

Marijn Bauters (M)

Department of Environment, Faculty of Bioscience Engineering, Ghent University, Ghent 9000, Belgium.

Meike Piepenbring (M)

Mycology Working Group, Goethe University Frankfurt am Main, Frankfurt am Main 60438, Germany.

Nalin N Wijayawardene (NN)

College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, China.

Nourou Yorou (N)

Research Unit Tropical Mycology and Plants-Soil Fungi Interactions, University of Parakou, Parakou 00229, Benin.

Olavi Kurina (O)

Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu 51006, Estonia.

Peter Mortimer (P)

Center For Mountain Futures, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China.

Peter Meidl (P)

Freie Universität Berlin, Institut für Biologie, Berlin 14195, Germany.

Petr Kohout (P)

Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic.

Rasmus Puusepp (R)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.

Rein Drenkhan (R)

Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu 51006, Estonia.

Roberto Garibay-Orijel (R)

Instituto de Biología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.

Roberto Godoy (R)

Instituto Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia, Chile.

Saad Alkahtani (S)

Department of Zoology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia.

Saleh Rahimlou (S)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.

Sergey Dudov (S)

Department of Ecology and Plant Geography, Moscow Lomonosov State University, Moscow 119234, Russia.

Sergei Põlme (S)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.
Natural History Museum, University of Tartu, Tartu 51003, Estonia.

Soumya Ghosh (S)

Department of Genetics, Faculty of Natural and Agricultural Sciences, University of the Free State, Bloemfontein 9300, South Africa.

Sunil Mundra (S)

Department of Biology, College of Science, United Arab Emirates University (UAEU), Al Ain, UAE.

Talaat Ahmed (T)

Environmental Science Center, Qatar University, Doha, Qatar.

Tarquin Netherway (T)

Department of Ecology, Swedish University of Agricultural Sciences, Uppsala 75007, Sweden.

Terry Henkel (T)

Department of Biological Sciences, California State Polytechnic University, Arcata, CA 95521, USA.

Tomas Roslin (T)

Department of Ecology, Swedish University of Agricultural Sciences, Uppsala 75007, Sweden.

Vincent Nteziryayo (V)

Department of Food Science and Technology, University of Burundi, Bujumbura Burundi.

Vladimir Fedosov (V)

Department of Ecology and Plant Geography, Moscow Lomonosov State University, Moscow 119234, Russia.

Vladimir Onipchenko (V)

Department of Ecology and Plant Geography, Moscow Lomonosov State University, Moscow 119234, Russia.

Weeragalle Arachchillage Erandi Yasanthika (WAE)

Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.

Young Lim (Y)

School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea.

Michael Van Nuland (M)

Society for the Protection of Underground Networks (SPUN), Dover, DE 19901, USA.

Nadejda Soudzilovskaia (N)

Centre for Environmental Sciences, Hasselt University, Hasselt 3500, Belgium.

Alexandre Antonelli (A)

Royal Botanic Gardens, Kew, Richmond TW9 3AE, UK.

Urmas Kõljalg (U)

Institute of Ecology and Earth Sciences, University of Tartu, Tartu 50409, Estonia.
Natural History Museum, University of Tartu, Tartu 51003, Estonia.

Kessy Abarenkov (K)

Natural History Museum, University of Tartu, Tartu 51003, Estonia.

Leho Tedersoo (L)

Center of Mycology and Microbiology, University of Tartu, Tartu 50409, Estonia.
Department of Zoology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C

Classifications MeSH