Cyclic Ion Mobility for Hydrogen/Deuterium Exchange-Mass Spectrometry Applications.


Journal

Analytical chemistry
ISSN: 1520-6882
Titre abrégé: Anal Chem
Pays: United States
ID NLM: 0370536

Informations de publication

Date de publication:
16 Apr 2024
Historique:
medline: 17 4 2024
pubmed: 2 4 2024
entrez: 1 4 2024
Statut: ppublish

Résumé

Hydrogen/deuterium exchange-mass spectrometry (HDX-MS) has emerged as a powerful tool to probe protein dynamics. As a bottom-up technique, HDX-MS provides information at peptide-level resolution, allowing structural localization of dynamic changes. Consequently, the HDX-MS data quality is largely determined by the number of peptides that are identified and monitored after deuteration. Integration of ion mobility (IM) into HDX-MS workflows has been shown to increase the data quality by providing an orthogonal mode of peptide ion separation in the gas phase. This is of critical importance for challenging targets such as integral membrane proteins (IMPs), which often suffer from low sequence coverage or redundancy in HDX-MS analyses. The increasing complexity of samples being investigated by HDX-MS, such as membrane mimetic reconstituted and

Identifiants

pubmed: 38561318
doi: 10.1021/acs.analchem.3c05753
pmc: PMC11024883
doi:

Substances chimiques

Deuterium AR09D82C7G
Peptides 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

5869-5877

Références

Anal Chim Acta. 2016 Oct 12;940:8-20
pubmed: 27662755
J Am Soc Mass Spectrom. 2011 Jul;22(7):1134-45
pubmed: 21953095
Anal Chem. 2010 Feb 1;82(3):1100-8
pubmed: 20058880
Anal Chem. 2013 Aug 6;85(15):7003-8
pubmed: 23855480
Anal Chem. 2016 Dec 6;88(23):11639-11646
pubmed: 27934120
J Am Soc Mass Spectrom. 2017 Jun;28(6):1192-1202
pubmed: 28374315
Expert Rev Proteomics. 2011 Feb;8(1):43-59
pubmed: 21329427
J Am Soc Mass Spectrom. 2020 Apr 1;31(4):996-999
pubmed: 32141743
Anal Chem. 2016 Oct 4;88(19):9469-9478
pubmed: 27573618
J Proteome Res. 2013 Jun 7;12(6):2323-39
pubmed: 23514362
Rapid Commun Mass Spectrom. 2011 Jun 15;25(11):1559-66
pubmed: 21594930
Anal Chem. 2006 Jun 15;78(12):4161-74
pubmed: 16771547
J Am Soc Mass Spectrom. 2021 Oct 6;32(10):2505-2512
pubmed: 34437803
Bioinformatics. 2019 Dec 15;35(24):5331-5333
pubmed: 31287496
J Mass Spectrom. 2023 Sep;58(9):e4957
pubmed: 37415399
J Am Soc Mass Spectrom. 2023 Dec 6;34(12):2672-2679
pubmed: 37930109
Proc Natl Acad Sci U S A. 2014 Nov 11;111(45):15873-80
pubmed: 25326421
J Am Soc Mass Spectrom. 2019 Jun;30(6):1028-1037
pubmed: 30977045
Anal Chem. 2019 Jul 2;91(13):8564-8573
pubmed: 31141659
Comput Struct Biotechnol J. 2022 Sep 26;20:5430-5439
pubmed: 36212541
Anal Chem. 2006 Apr 15;78(8):2802-9
pubmed: 16615796
J Am Soc Mass Spectrom. 2022 Jul 6;33(7):1282-1292
pubmed: 35732031
Rapid Commun Mass Spectrom. 2008 Sep;22(18):2898-904
pubmed: 18727141
Essays Biochem. 2023 Mar 29;67(2):301-314
pubmed: 36251047
J Chromatogr A. 2024 Jan 11;1714:464537
pubmed: 38157664
J Am Soc Mass Spectrom. 2017 Nov;28(11):2476-2482
pubmed: 28721674
Anal Chim Acta. 2021 Jan 25;1143:65-72
pubmed: 33384131
Anal Chem. 2010 Oct 1;82(19):8266-71
pubmed: 20809629
Anal Chem. 2017 Aug 1;89(15):7966-7973
pubmed: 28657298
J Chromatogr A. 2017 Nov 10;1523:275-282
pubmed: 28596009
Anal Chem. 2022 Aug 16;94(32):11113-11117
pubmed: 35913896
J Chromatogr A. 2023 Jan 25;1689:463742
pubmed: 36586285
Anal Chem. 2009 Feb 15;81(4):1482-7
pubmed: 19143495
Nat Commun. 2018 Oct 8;9(1):4151
pubmed: 30297844
Nature. 2012 Oct 18;490(7420):361-6
pubmed: 23075985
Bioinformatics. 2021 Apr 19;37(2):270-272
pubmed: 32722756
Nat Methods. 2019 Jul;16(7):595-602
pubmed: 31249422
J Am Soc Mass Spectrom. 2019 Nov;30(11):2185-2195
pubmed: 31493234
J Am Soc Mass Spectrom. 2018 Nov;29(11):2278-2281
pubmed: 30171440
Anal Chem. 2019 Sep 3;91(17):10970-10978
pubmed: 31408320
J Am Soc Mass Spectrom. 2018 Mar;29(3):623-629
pubmed: 29299838
Expert Rev Proteomics. 2013 Dec;10(6):551-66
pubmed: 24206228
Essays Biochem. 2023 Mar 29;67(2):187-200
pubmed: 36876893
J Am Soc Mass Spectrom. 2012 Dec;23(12):2132-9
pubmed: 22965280

Auteurs

Damon Griffiths (D)

Faculty of Biology, Medicine and Health, School of Biological Sciences, The University of Manchester, Manchester M13 9PT, United Kingdom.
Manchester Institute of Biotechnology, University of Manchester, Princess Street, Manchester M1 7DN, United Kingdom.

Malcolm Anderson (M)

Waters Corporation, Stamford Avenue, Altrincham Road, Wilmslow SK9 4AX, United Kingdom.

Keith Richardson (K)

Waters Corporation, Stamford Avenue, Altrincham Road, Wilmslow SK9 4AX, United Kingdom.

Satomi Inaba-Inoue (S)

Department of Life Sciences, Imperial College London, Exhibition Road, South Kensington, London SW7 2AZ, United Kingdom.
Rutherford Appleton Laboratory, Research Complex at Harwell, Oxfordshire, Didcot OX11 0FA, United Kingdom.
Diffraction and Scattering Division, Japan Synchrotron Radiation Research Institute, SPring-8, 1-1-1, Kouto, Sayo, Hyogo 679-5198, Japan.

William J Allen (WJ)

School of Biochemistry, University of Bristol, Bristol BS8 1TD, United Kingdom.

Ian Collinson (I)

School of Biochemistry, University of Bristol, Bristol BS8 1TD, United Kingdom.

Konstantinos Beis (K)

Department of Life Sciences, Imperial College London, Exhibition Road, South Kensington, London SW7 2AZ, United Kingdom.
Rutherford Appleton Laboratory, Research Complex at Harwell, Oxfordshire, Didcot OX11 0FA, United Kingdom.

Michael Morris (M)

Waters Corporation, Stamford Avenue, Altrincham Road, Wilmslow SK9 4AX, United Kingdom.

Kevin Giles (K)

Waters Corporation, Stamford Avenue, Altrincham Road, Wilmslow SK9 4AX, United Kingdom.

Argyris Politis (A)

Faculty of Biology, Medicine and Health, School of Biological Sciences, The University of Manchester, Manchester M13 9PT, United Kingdom.
Manchester Institute of Biotechnology, University of Manchester, Princess Street, Manchester M1 7DN, United Kingdom.

Articles similaires

Animals Huntington Disease Mitochondria Neurons Mice
Animals Adjuvants, Immunologic Mice Antigen-Presenting Cells Antigen Presentation
Hemolysin Proteins Artificial Cells Protein Engineering Protein Transport Cell Membrane
Substrate Specificity Peptides Catalysis Hydrolysis Protein Conformation

Classifications MeSH