Diffusive lensing as a mechanism of intracellular transport and compartmentalization.
agent-based modeling
cytoplasmic biophysics
diffusion
molecular dynamics
none
physics of living systems
space-dependent diffusivity
subcellular compartmentalization
Journal
eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614
Informations de publication
Date de publication:
18 Jun 2024
18 Jun 2024
Historique:
medline:
19
6
2024
pubmed:
19
6
2024
entrez:
19
6
2024
Statut:
epublish
Résumé
While inhomogeneous diffusivity has been identified as a ubiquitous feature of the cellular interior, its implications for particle mobility and concentration at different length scales remain largely unexplored. In this work, we use agent-based simulations of diffusion to investigate how heterogeneous diffusivity affects the movement and concentration of diffusing particles. We propose that a nonequilibrium mode of membrane-less compartmentalization arising from the convergence of diffusive trajectories into low-diffusive sinks, which we call 'diffusive lensing,' is relevant for living systems. Our work highlights the phenomenon of diffusive lensing as a potentially key driver of mesoscale dynamics in the cytoplasm, with possible far-reaching implications for biochemical processes.
Identifiants
pubmed: 38896469
doi: 10.7554/eLife.89794
pii: 89794
doi:
pii:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NIH HHS
ID : R35GM153301
Pays : United States
Organisme : National Science Foundation
ID : DGE-1656518
Informations de copyright
© 2023, Raja Venkatesh et al.
Déclaration de conflit d'intérêts
AR, KL, DW, OB No competing interests declared