Improved Classification Performance of Bacteria in Interference Using Raman and Fourier-Transform Infrared Spectroscopy Combined with Machine Learning.


Journal

Molecules (Basel, Switzerland)
ISSN: 1420-3049
Titre abrégé: Molecules
Pays: Switzerland
ID NLM: 100964009

Informations de publication

Date de publication:
21 Jun 2024
Historique:
received: 22 05 2024
revised: 18 06 2024
accepted: 20 06 2024
medline: 13 7 2024
pubmed: 13 7 2024
entrez: 13 7 2024
Statut: epublish

Résumé

The rapid and sensitive detection of pathogenic and suspicious bioaerosols are essential for public health protection. The impact of pollen on the identification of bacterial species by Raman and Fourier-Transform Infrared (FTIR) spectra cannot be overlooked. The spectral features of the fourteen class samples were preprocessed and extracted by machine learning algorithms to serve as input data for training purposes. The two types of spectral data were classified using classification models. The partial least squares discriminant analysis (PLS-DA) model achieved classification accuracies of 78.57% and 92.85%, respectively. The Raman spectral data were accurately classified by the support vector machine (SVM) algorithm, with a 100% accuracy rate. The two spectra and their fusion data were correctly classified with 100% accuracy by the random forest (RF) algorithm. The spectral processed algorithms investigated provide an efficient method for eliminating the impact of pollen interference.

Identifiants

pubmed: 38998917
pii: molecules29132966
doi: 10.3390/molecules29132966
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : State Key Laboratory of NBC Protection for Civilian
ID : SKLNBC2022-06

Auteurs

Pengjie Zhang (P)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

Jiwei Xu (J)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

Bin Du (B)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

Qianyu Yang (Q)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

Bing Liu (B)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

Jianjie Xu (J)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

Zhaoyang Tong (Z)

State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China.

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Classifications MeSH