A homeostatic gut-to-brain insulin antagonist restrains neuronally stimulated fat loss.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
11 Aug 2024
Historique:
received: 29 09 2023
accepted: 29 07 2024
medline: 11 8 2024
pubmed: 11 8 2024
entrez: 10 8 2024
Statut: epublish

Résumé

In C. elegans mechanisms by which peripheral organs relay internal state information to the nervous system remain unknown, although strong evidence suggests that such signals do exist. Here we report the discovery of a peptide of the ancestral insulin superfamily called INS-7 that functions as an enteroendocrine peptide and is secreted from specialized cells of the intestine. INS-7 secretion is stimulated by food withdrawal, increases during fasting and acts as a bona fide gut-to-brain peptide that attenuates the release of a neuropeptide that drives fat loss in the periphery. Thus, INS-7 functions as a homeostatic signal from the intestine that gates the neuronal drive to stimulate fat loss during food shortage. Mechanistically, INS-7 functions as an antagonist at the canonical DAF-2 receptor and functions via FOXO and AMPK signaling in ASI neurons. Phylogenetic analysis suggests that INS-7 bears greater resemblance to members of the broad insulin/relaxin superfamily than to conventional mammalian insulin and IGF peptides. The discovery of an endogenous insulin antagonist secreted by specialized intestinal cells with enteroendocrine functions suggests unexpected and important properties of the intestine and its role in directing neuronal functions.

Identifiants

pubmed: 39127676
doi: 10.1038/s41467-024-51077-3
pii: 10.1038/s41467-024-51077-3
doi:

Substances chimiques

Insulin 0
Caenorhabditis elegans Proteins 0
Receptor, Insulin EC 2.7.10.1
Neuropeptides 0
DAF-2 protein, C elegans EC 2.7.10.1
Forkhead Transcription Factors 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

6869

Subventions

Organisme : NIDDK NIH HHS
ID : R01 DK124706
Pays : United States
Organisme : NIA NIH HHS
ID : R01 AG056648
Pays : United States

Informations de copyright

© 2024. The Author(s).

Références

Lemieux, G. A. & Ashrafi, K. Neural regulatory pathways of feeding and fat in caenorhabditis elegans. Annu. Rev. Genet 49, 413–438 (2015).
pubmed: 26473379 doi: 10.1146/annurev-genet-120213-092244
Caron, A., Lee, S., Elmquist, J. K. & Gautron, L. Leptin and brain-adipose crosstalks. Nat. Rev. Neurosci. 19, 153–165 (2018).
pubmed: 29449715 pmcid: 5962962 doi: 10.1038/nrn.2018.7
Musselman, L. P. & Kuhnlein, R. P. Drosophila as a model to study obesity and metabolic disease. J. Exp. Biol. 221, jeb163881 (2018).
Castillo-Armengol, J., Fajas, L. & Lopez-Mejia, I. C. Inter-organ communication: a gatekeeper for metabolic health. EMBO Rep. 20, e47903 (2019).
pubmed: 31423716 pmcid: 6726901 doi: 10.15252/embr.201947903
Priest, C. & Tontonoz, P. Inter-organ cross-talk in metabolic syndrome. Nat. Metab. 1, 1177–1188 (2019).
pubmed: 32694672 doi: 10.1038/s42255-019-0145-5
Kubota, N. et al. Adiponectin stimulates AMP-activated protein kinase in the hypothalamus and increases food intake. Cell Metab. 6, 55–68 (2007).
pubmed: 17618856 doi: 10.1016/j.cmet.2007.06.003
Bookout, A. L. et al. FGF21 regulates metabolism and circadian behavior by acting on the nervous system. Nat. Med. 19, 1147–1152 (2013).
pubmed: 23933984 pmcid: 3769420 doi: 10.1038/nm.3249
Inagaki, T. et al. Fibroblast growth factor 15 functions as an enterohepatic signal to regulate bile acid homeostasis. Cell Metab. 2, 217–225 (2005).
pubmed: 16213224 doi: 10.1016/j.cmet.2005.09.001
Ge, X. et al. LEAP2 is an endogenous antagonist of the ghrelin receptor. Cell Metab. 27, 461–469.e466 (2018).
pubmed: 29233536 doi: 10.1016/j.cmet.2017.10.016
Batterham, R. L. et al. Gut hormone PYY(3-36) physiologically inhibits food intake. Nature 418, 650–654 (2002).
pubmed: 12167864 doi: 10.1038/nature00887
Turton, M. D. et al. A role for glucagon-like peptide-1 in the central regulation of feeding. Nature 379, 69–72 (1996).
pubmed: 8538742 doi: 10.1038/379069a0
Srinivasan, S. Neuroendocrine control of lipid metabolism: lessons from C. elegans. J. Neurogenet. 34, 482–488 (2020).
pubmed: 32619378 pmcid: 7779659 doi: 10.1080/01677063.2020.1777116
Srinivasan, S. Regulation of body fat in Caenorhabditis elegans. Annu. Rev. Physiol. 77, 161–178 (2015).
pubmed: 25340962 doi: 10.1146/annurev-physiol-021014-071704
Hussey, R. et al. Oxygen-sensing neurons reciprocally regulate peripheral lipid metabolism via neuropeptide signaling in Caenorhabditis elegans. PLoS Genet. 14, e1007305 (2018).
pubmed: 29579048 pmcid: 5886693 doi: 10.1371/journal.pgen.1007305
Hussey, R. et al. Pheromone-sensing neurons regulate peripheral lipid metabolism in Caenorhabditis elegans. PLoS Genet. 13, e1006806 (2017).
pubmed: 28545126 pmcid: 5456406 doi: 10.1371/journal.pgen.1006806
Noble, T., Stieglitz, J. & Srinivasan, S. An integrated serotonin and octopamine neuronal circuit directs the release of an endocrine signal to control C. elegans body fat. Cell Metab. 18, 672–684 (2013).
pubmed: 24120942 doi: 10.1016/j.cmet.2013.09.007
Greer, E. R., Perez, C. L., Van Gilst, M. R., Lee, B. H. & Ashrafi, K. Neural and molecular dissection of a C. elegans sensory circuit that regulates fat and feeding. Cell Metab. 8, 118–131 (2008).
pubmed: 18680713 pmcid: 2556218 doi: 10.1016/j.cmet.2008.06.005
Mak, H. Y., Nelson, L. S., Basson, M., Johnson, C. D. & Ruvkun, G. Polygenic control of Caenorhabditis elegans fat storage. Nat. Genet. 38, 363–368 (2006).
pubmed: 16462744 doi: 10.1038/ng1739
Altun, Z. F. & Hall, D. H. Alimentary system, intestine. WormAtlas (2009).
Palamiuc, L. et al. A tachykinin-like neuroendocrine signalling axis couples central serotonin action and nutrient sensing with peripheral lipid metabolism. Nat. Commun. 8, 14237 (2017).
pubmed: 28128367 pmcid: 5290170 doi: 10.1038/ncomms14237
Lee, K. & Mylonakis, E. An intestine-derived neuropeptide controls avoidance behavior in Caenorhabditis elegans. Cell Rep. 20, 2501–2512 (2017).
pubmed: 28877481 doi: 10.1016/j.celrep.2017.08.053
Matty, M. A. et al. Intestine-to-neuronal signaling alters risk-taking behaviors in food-deprived Caenorhabditis elegans. PLoS Genet. 18, e1010178 (2022).
pubmed: 35511794 pmcid: 9070953 doi: 10.1371/journal.pgen.1010178
Ryu, L. et al. Feeding state regulates pheromone-mediated avoidance behavior via the insulin signaling pathway in Caenorhabditis elegans. EMBO J. 37, e98402 (2018).
Wang, H. et al. Neuropeptide secreted from a pacemaker activates neurons to control a rhythmic behavior. Curr. Biol. 23, 746–754 (2013).
pubmed: 23583549 pmcid: 3651789 doi: 10.1016/j.cub.2013.03.049
Bouagnon, A. D. et al. Intestinal peroxisomal fatty acid beta-oxidation regulates neural serotonin signaling through a feedback mechanism. PLoS Biol. 17, e3000242 (2019).
pubmed: 31805041 pmcid: 6917301 doi: 10.1371/journal.pbio.3000242
Witham, E. et al. C. elegans body cavity neurons are homeostatic sensors that integrate fluctuations in oxygen availability and internal nutrient reserves. Cell Rep. 14, 1641–1654 (2016).
pubmed: 26876168 pmcid: 4767172 doi: 10.1016/j.celrep.2016.01.052
McKay, R. M., McKay, J. P., Avery, L. & Graff, J. M. C elegans: a model for exploring the genetics of fat storage. Dev. Cell 4, 131–142 (2003).
pubmed: 12530969 pmcid: 4445237 doi: 10.1016/S1534-5807(02)00411-2
Kniazeva, M. et al. Suppression of the ELO-2 FA elongation activity results in alterations of the fatty acid composition and multiple physiological defects, including abnormal ultradian rhythms, in Caenorhabditis elegans. Genetics 163, 159–169 (2003).
pubmed: 12586704 pmcid: 1462428 doi: 10.1093/genetics/163.1.159
Ritter, A. D. et al. Complex expression dynamics and robustness in C. elegans insulin networks. Genome Res. 23, 954–965 (2013).
pubmed: 23539137 pmcid: 3668363 doi: 10.1101/gr.150466.112
Baugh, L. R., Kurhanewicz, N. & Sternberg, P. W. Sensitive and precise quantification of insulin-like mRNA expression in Caenorhabditis elegans. PLoS ONE 6, e18086 (2011).
pubmed: 21445366 pmcid: 3062572 doi: 10.1371/journal.pone.0018086
Sulston, J. E., Schierenberg, E., White, J. G. & Thomson, J. N. The embryonic cell lineage of the nematode Caenorhabditis elegans. Dev. Biol. 100, 64–119 (1983).
pubmed: 6684600 doi: 10.1016/0012-1606(83)90201-4
Walker, A. K. et al. Conserved role of SIRT1 orthologs in fasting-dependent inhibition of the lipid/cholesterol regulator SREBP. Genes Dev. 24, 1403–1417 (2010).
pubmed: 20595232 pmcid: 2895199 doi: 10.1101/gad.1901210
Jang, M. H. et al. Intestinal villous M cells: an antigen entry site in the mucosal epithelium. Proc. Natl Acad. Sci. USA 101, 6110–6115 (2004).
pubmed: 15071180 pmcid: 395931 doi: 10.1073/pnas.0400969101
Shearman, D. J. C. & Muir, A. R. Observations on the secretory cycle of goblet cells. Q. J. Exp. Physiol. Cogn. Med. Sci. 45, 337–342 (1960).
Littlejohn, N. K., Seban, N., Liu, C. C. & Srinivasan, S. A feedback loop governs the relationship between lipid metabolism and longevity. Elife 9, e58815 (2020).
Hakuno, F. & Takahashi, S. I. IGF1 receptor signaling pathways. J. Mol. Endocrinol. 61, T69–T86 (2018).
pubmed: 29535161 doi: 10.1530/JME-17-0311
Kimura, K. D., Tissenbaum, H. A., Liu, Y. & Ruvkun, G. daf-2, an insulin receptor-like gene that regulates longevity and diapause in Caenorhabditis elegans. Science 277, 942–946 (1997).
pubmed: 9252323 doi: 10.1126/science.277.5328.942
Taylor, S. R. et al. Molecular topography of an entire nervous system. Cell 184, 4329–4347.e4323 (2021).
pubmed: 34237253 pmcid: 8710130 doi: 10.1016/j.cell.2021.06.023
Jose, A. M., Smith, J. J. & Hunter, C. P. Export of RNA silencing from C. elegans tissues does not require the RNA channel SID-1. Proc. Natl Acad. Sci. USA 106, 2283–2288 (2009).
pubmed: 19168628 pmcid: 2650148 doi: 10.1073/pnas.0809760106
Chen, Z. et al. Two insulin-like peptides antagonistically regulate aversive olfactory learning in C. elegans. Neuron 77, 572–585 (2013).
pubmed: 23395381 pmcid: 3569836 doi: 10.1016/j.neuron.2012.11.025
Murphy, C. T., Lee, S. J. & Kenyon, C. Tissue entrainment by feedback regulation of insulin gene expression in the endoderm of Caenorhabditis elegans. Proc. Natl Acad. Sci. USA 104, 19046–19050 (2007).
pubmed: 18025456 pmcid: 2141905 doi: 10.1073/pnas.0709613104
Murphy, C. T. et al. Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans. Nature 424, 277–283 (2003).
pubmed: 12845331 doi: 10.1038/nature01789
Henderson, S. T. & Johnson, T. E. daf-16 integrates developmental and environmental inputs to mediate aging in the nematode Caenorhabditis elegans. Curr. Biol. 11, 1975–1980 (2001).
pubmed: 11747825 doi: 10.1016/S0960-9822(01)00594-2
Lin, K., Hsin, H., Libina, N. & Kenyon, C. Regulation of the Caenorhabditis elegans longevity protein DAF-16 by insulin/IGF-1 and germline signaling. Nat. Genet. 28, 139–145 (2001).
pubmed: 11381260 doi: 10.1038/88850
Lee, R. Y., Hench, J. & Ruvkun, G. Regulation of C. elegans DAF-16 and its human ortholog FKHRL1 by the daf-2 insulin-like signaling pathway. Curr. Biol. 11, 1950–1957 (2001).
pubmed: 11747821 doi: 10.1016/S0960-9822(01)00595-4
Furuyama, T., Nakazawa, T., Nakano, I. & Mori, N. Identification of the differential distribution patterns of mRNAs and consensus binding sequences for mouse DAF-16 homologues. Biochem. J. 349, 629–634 (2000).
pubmed: 10880363 pmcid: 1221187 doi: 10.1042/bj3490629
Oh, S. W. et al. Identification of direct DAF-16 targets controlling longevity, metabolism and diapause by chromatin immunoprecipitation. Nat. Genet. 38, 251–257 (2006).
pubmed: 16380712 doi: 10.1038/ng1723
McElwee, J., Bubb, K. & Thomas, J. H. Transcriptional outputs of the Caenorhabditis elegans forkhead protein DAF-16. Aging Cell 2, 111–121 (2003).
pubmed: 12882324 doi: 10.1046/j.1474-9728.2003.00043.x
Lee, S. S., Kennedy, S., Tolonen, A. C. & Ruvkun, G. DAF-16 target genes that control C. elegans life-span and metabolism. Science 300, 644–647 (2003).
pubmed: 12690206 doi: 10.1126/science.1083614
Schuster, E. et al. DamID in C. elegans reveals longevity-associated targets of DAF-16/FoxO. Mol. Syst. Biol. 6, 399 (2010).
pubmed: 20706209 pmcid: 2950082 doi: 10.1038/msb.2010.54
Greer, E. L. et al. An AMPK-FOXO pathway mediates longevity induced by a novel method of dietary restriction in C. elegans. Curr. Biol. 17, 1646–1656 (2007).
pubmed: 17900900 pmcid: 2185793 doi: 10.1016/j.cub.2007.08.047
Tullet, J. M. et al. DAF-16/FoxO directly regulates an atypical AMP-activated protein kinase gamma isoform to mediate the effects of insulin/IGF-1 signaling on aging in Caenorhabditis elegans. PLoS Genet. 10, e1004109 (2014).
pubmed: 24516399 pmcid: 3916255 doi: 10.1371/journal.pgen.1004109
Campbell, J. E. & Newgard, C. B. Mechanisms controlling pancreatic islet cell function in insulin secretion. Nat. Rev. Mol. Cell Biol. 22, 142–158 (2021).
pubmed: 33398164 pmcid: 8115730 doi: 10.1038/s41580-020-00317-7
Sieburth, D., Madison, J. M. & Kaplan, J. M. PKC-1 regulates secretion of neuropeptides. Nat. Neurosci. 10, 49–57 (2007).
pubmed: 17128266 doi: 10.1038/nn1810
Speese, S. et al. UNC-31 (CAPS) is required for dense-core vesicle but not synaptic vesicle exocytosis in Caenorhabditis elegans. J. Neurosci. 27, 6150–6162 (2007).
pubmed: 17553987 pmcid: 6672138 doi: 10.1523/JNEUROSCI.1466-07.2007
Mahoney, T. R. et al. Intestinal signaling to GABAergic neurons regulates a rhythmic behavior in Caenorhabditis elegans. Proc. Natl Acad. Sci. USA 105, 16350–16355 (2008).
pubmed: 18852466 pmcid: 2570992 doi: 10.1073/pnas.0803617105
Kao, G. et al. ASNA-1 positively regulates insulin secretion in C. elegans and mammalian cells. Cell 128, 577–587 (2007).
pubmed: 17289575 doi: 10.1016/j.cell.2006.12.031
Zheng, S. et al. A functional study of all 40 Caenorhabditis elegans insulin-like peptides. J. Biol. Chem. 293, 16912–16922 (2018).
pubmed: 30206121 pmcid: 6204898 doi: 10.1074/jbc.RA118.004542
Ohno, H. et al. Role of synaptic phosphatidylinositol 3-kinase in a behavioral learning response in C. elegans. Science 345, 313–317 (2014).
pubmed: 25035490 doi: 10.1126/science.1250709
Tomioka, M., Naito, Y., Kuroyanagi, H. & Iino, Y. Splicing factors control C. elegans behavioural learning in a single neuron by producing DAF-2c receptor. Nat. Commun. 7, 11645 (2016).
pubmed: 27198602 pmcid: 4876481 doi: 10.1038/ncomms11645
Cheng, D. et al. Insulin/IGF signaling regulates presynaptic glutamate release in aversive olfactory learning. Cell Rep. 41, 111685 (2022).
pubmed: 36417877 doi: 10.1016/j.celrep.2022.111685
Kawli, T. & Tan, M. W. Neuroendocrine signals modulate the innate immunity of Caenorhabditis elegans through insulin signaling. Nat. Immunol. 9, 1415–1424 (2008).
pubmed: 18854822 doi: 10.1038/ni.1672
Uno, M. et al. Neuronal DAF-16-to-intestinal DAF-16 communication underlies organismal lifespan extension in C. elegans. iScience 24, 102706 (2021).
pubmed: 34235410 pmcid: 8246587 doi: 10.1016/j.isci.2021.102706
Libina, N., Berman, J. R. & Kenyon, C. Tissue-specific activities of C. elegans DAF-16 in the regulation of lifespan. Cell 115, 489–502 (2003).
pubmed: 14622602 doi: 10.1016/S0092-8674(03)00889-4
Tepper, R. G. et al. PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity. Cell 154, 676–690 (2013).
pubmed: 23911329 pmcid: 3763726 doi: 10.1016/j.cell.2013.07.006
Honjoh, S., Yamamoto, T., Uno, M. & Nishida, E. Signalling through RHEB-1 mediates intermittent fasting-induced longevity in C. elegans. Nature 457, 726–730 (2009).
pubmed: 19079239 doi: 10.1038/nature07583
Grosse, J. et al. Insulin-like peptide 5 is an orexigenic gastrointestinal hormone. Proc. Natl Acad. Sci. USA 111, 11133–11138 (2014).
pubmed: 25028498 pmcid: 4121845 doi: 10.1073/pnas.1411413111
Lewis, J. E. et al. Relaxin/insulin-like family peptide receptor 4 (Rxfp4) expressing hypothalamic neurons modulate food intake and preference in mice. Mol. Metab. 66, 101604 (2022).
pubmed: 36184065 pmcid: 9579047 doi: 10.1016/j.molmet.2022.101604
Lee, Y. S. et al. Insulin-like peptide 5 is a microbially regulated peptide that promotes hepatic glucose production. Mol. Metab. 5, 263–270 (2016).
pubmed: 27069866 pmcid: 4811983 doi: 10.1016/j.molmet.2016.01.007
Wachsmuth, H. R., Weninger, S. N. & Duca, F. A. Role of the gut-brain axis in energy and glucose metabolism. Exp. Mol. Med. 54, 377–392 (2022).
pubmed: 35474341 pmcid: 9076644 doi: 10.1038/s12276-021-00677-w
Prinz, P. & Stengel, A. Control of food intake by gastrointestinal peptides: mechanisms of action and possible modulation in the treatment of obesity. J. Neurogastroenterol. Motil. 23, 180–196 (2017).
pubmed: 28096522 pmcid: 5383113 doi: 10.5056/jnm16194
Gribble, F. M. & Reimann, F. Enteroendocrine cells: chemosensors in the intestinal epithelium. Annu. Rev. Physiol. 78, 277–299 (2016).
pubmed: 26442437 doi: 10.1146/annurev-physiol-021115-105439
Tang-Christensen, M. et al. Central administration of GLP-1-(7-36) amide inhibits food and water intake in rats. Am. J. Physiol. 271, R848–R856 (1996).
pubmed: 8897973
Dockray, G. J. Cholecystokinin and gut-brain signalling. Regul. Pept. 155, 6–10 (2009).
pubmed: 19345244 doi: 10.1016/j.regpep.2009.03.015
Krieger, J. P. et al. Knockdown of GLP-1 receptors in vagal afferents affects normal food intake and glycemia. Diabetes 65, 34–43 (2016).
pubmed: 26470787 doi: 10.2337/db15-0973
Garvey, W. T. et al. Two-year effects of semaglutide in adults with overweight or obesity: the STEP 5 trial. Nat. Med. 28, 2083–2091 (2022).
pubmed: 36216945 pmcid: 9556320 doi: 10.1038/s41591-022-02026-4
Coskun, T. et al. LY3298176, a novel dual GIP and GLP-1 receptor agonist for the treatment of type 2 diabetes mellitus: from discovery to clinical proof of concept. Mol. Metab. 18, 3–14 (2018).
pubmed: 30473097 pmcid: 6308032 doi: 10.1016/j.molmet.2018.09.009
Titos, I. et al. A gut-secreted peptide suppresses arousability from sleep. Cell 186, 1382–1397.e1321 (2023).
pubmed: 36958331 pmcid: 10216829 doi: 10.1016/j.cell.2023.02.022
Zhao, Y. et al. Hedgehog-mediated gut-taste neuron axis controls sweet perception in Drosophila. Nat. Commun. 13, 7810 (2022).
pubmed: 36535958 pmcid: 9763350 doi: 10.1038/s41467-022-35527-4
Brenner, S. The genetics of Caenorhabditis elegans. Genetics 77, 71–94 (1974).
pubmed: 4366476 pmcid: 1213120 doi: 10.1093/genetics/77.1.71
Esposito, G., Di Schiavi, E., Bergamasco, C. & Bazzicalupo, P. Efficient and cell specific knock-down of gene function in targeted C. elegans neurons. Gene 395, 170–176 (2007).
pubmed: 17459615 doi: 10.1016/j.gene.2007.03.002
Kamath, R. S. & Ahringer, J. Genome-wide RNAi screening in Caenorhabditis elegans. Methods 30, 313–321 (2003).
pubmed: 12828945 doi: 10.1016/S1046-2023(03)00050-1
Srinivasan, S. et al. Serotonin regulates C. elegans fat and feeding through independent molecular mechanisms. Cell Metab. 7, 533–544 (2008).
pubmed: 18522834 pmcid: 2495008 doi: 10.1016/j.cmet.2008.04.012
Au, V. et al. CRISPR/Cas9 methodology for the generation of knockout deletions in Caenorhabditis elegans. G3 9, 135–144 (2019).
pubmed: 30420468 doi: 10.1534/g3.118.200778
Arribere, J. A. et al. Efficient marker-free recovery of custom genetic modifications with CRISPR/Cas9 in Caenorhabditis elegans. Genetics 198, 837–846 (2014).
pubmed: 25161212 pmcid: 4224173 doi: 10.1534/genetics.114.169730
Dickinson, D. J., Pani, A. M., Heppert, J. K., Higgins, C. D. & Goldstein, B. Streamlined genome engineering with a self-excising drug selection cassette. Genetics 200, 1035–1049 (2015).
pubmed: 26044593 pmcid: 4574250 doi: 10.1534/genetics.115.178335
Sawin, E. R., Ranganathan, R. & Horvitz, H. R. C. elegans locomotory rate is modulated by the environment through a dopaminergic pathway and by experience through a serotonergic pathway. Neuron 26, 619–631 (2000).
pubmed: 10896158 doi: 10.1016/S0896-6273(00)81199-X
Nawa, M. et al. Reduced expression of BTBD10, an Akt activator, leads to motor neuron death. Cell Death Differ. 19, 1398–1407 (2012).
pubmed: 22388351 pmcid: 3392628 doi: 10.1038/cdd.2012.19
Jumper, J. et al. Highly accurate protein structure prediction with AlphaFold. Nature 596, 583–589 (2021).
pubmed: 34265844 pmcid: 8371605 doi: 10.1038/s41586-021-03819-2
Varadi, M. et al. AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models. Nucleic Acids Res. 50, D439–D444 (2022).
pubmed: 34791371 doi: 10.1093/nar/gkab1061
Madeira, F. et al. Search and sequence analysis tools services from EMBL-EBI in 2022. Nucleic Acids Res. 50, W276–W279 (2022).
pubmed: 35412617 pmcid: 9252731 doi: 10.1093/nar/gkac240

Auteurs

Chung-Chih Liu (CC)

Department of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, San Diego, CA, USA.
The Skaggs Graduate School of Chemical and Biological Sciences, The Scripps Research Institute, San Diego, CA, USA.

Ayub Khan (A)

Department of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, San Diego, CA, USA.

Nicolas Seban (N)

Department of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, San Diego, CA, USA.

Nicole Littlejohn (N)

Department of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, San Diego, CA, USA.

Aayushi Shah (A)

Department of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, San Diego, CA, USA.

Supriya Srinivasan (S)

Department of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, San Diego, CA, USA. supriya@scripps.edu.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing
Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice

Classifications MeSH