A physical derivation of high-flux ion transport in biological channel via quantum ion coherence.
Journal
Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555
Informations de publication
Date de publication:
21 Aug 2024
21 Aug 2024
Historique:
received:
20
10
2023
accepted:
25
07
2024
medline:
22
8
2024
pubmed:
22
8
2024
entrez:
21
8
2024
Statut:
epublish
Résumé
Biological ion channels usually conduct the high-flux transport of 10
Identifiants
pubmed: 39168976
doi: 10.1038/s41467-024-51045-x
pii: 10.1038/s41467-024-51045-x
doi:
Substances chimiques
Potassium Channels
0
Potassium
RWP5GA015D
Bacterial Proteins
0
prokaryotic potassium channel
0
Ions
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
7189Subventions
Organisme : National Natural Science Foundation of China (National Science Foundation of China)
ID : T2394532
Organisme : National Natural Science Foundation of China (National Science Foundation of China)
ID : T224100002
Organisme : National Natural Science Foundation of China (National Science Foundation of China)
ID : 21873034
Informations de copyright
© 2024. The Author(s).
Références
Hille, B. Ion Channels of Excitable Membranes (Oxford University Press, 2001).
Doyle, D. A. et al. The structure of the potassium channel: molecular basis of K
pubmed: 9525859
Ren, D. et al. A prokaryotic voltage-gated sodium channel. Science 294, 2372–2375 (2001).
pubmed: 11743207
Lee, K. S. & Tsein, R. W. Reversal of current through calcium channels in dialysed single heart cells. Nature 297, 498–501 (1982).
pubmed: 6283359
Hess, P. & Tsien, R. W. Mechanism of ion permeation through calcium channels. Nature 309, 453–456 (1984).
pubmed: 6328315
Tsien, R. W., Hess, P., McCleskey, E. W. & Rosenberg, R. L. Calcium channels: mechanisms of selectivity, permeation and block. Annu. Rev. Biophys. Chem. 16, 265–290 (1987).
Kandel, E. R., Koester, J. D., Mack, S. H. & Siegelbaum, S. A. Principles of neural science (McGraw Hill, 2021).
Zhang, X., Song, B. & Jiang, L. From dynamic superwettability to ionic/molecular superfluidity. Acc. Chem. Res. 55, 1195–1204 (2022).
pubmed: 35445598
Zhang, H., Li, X., Hou, J., Jiang, L. & Wang, H. Angstrom-scale ion channels towards single-ion selectivity. Chem. Soc. Rev. 51, 2224–2254 (2022).
pubmed: 35225300
Xin, W. et al. Biomimetic KcsA channels with ultra-selective K
pubmed: 35361770
pmcid: 8971412
Zhang, H. et al. Ultrafast selective transport of alkali metal ions in metal organic frameworks with subnanometer pores. Sci. Adv. 4, eaaq0066 (2018).
pubmed: 29487910
pmcid: 5817922
Li, X. et al. Fast and selective fluoride ion conduction in sub-1-nanometer metal-organic framework channels. Nat. Commun. 10, 2490 (2019).
pubmed: 31186413
pmcid: 6560108
Lu, J. et al. An artificial sodium-selective subnanochannel. Sci. Adv. 9, eabq1369 (2023).
pubmed: 36706186
pmcid: 9882983
Ye, T. et al. Artificial sodium-selective ionic device based on crown-ether crystals with subnanometer pores. Nat. Commun. 12, 5231 (2021).
pubmed: 34471132
pmcid: 8410819
Song, J. H., Yu, H.-W., Ham, M.-H. & Kim, I. S. Tunable ion sieving of graphene membranes through the control of nitrogen-bonding configuration. Nano Lett. 18, 5506–5513 (2018).
pubmed: 30080971
Zuo, P. et al. Near-frictionless ion transport within triazine framework membranes. Nature 617, 299–305 (2023).
pubmed: 37100908
pmcid: 10131500
Roux, B. Ion channels and ion selectivity. Essays Biochem 61, 201–209 (2017).
pubmed: 28487397
pmcid: 5544903
Andersen, O. S. Perspectives on: ion selectivity. J. Gen. Physiol. 137, 393–395 (2011).
pubmed: 21518827
pmcid: 3082926
MacKinnon, R. Potassium channels and the atomic basis of selective ion conduction. Angew. Chem. Int. Ed. 43, 4265–4277 (2004).
Flood, E., Boiteux, C., Lev, B., Vorobyov, I. & Allen, T. W. Atomistic simulations of membrane ion channel conduction, gating, and modulation. Chem. Rev. 119, 7737–7832 (2019).
pubmed: 31246417
Kratochvil, H. T. et al. Instantaneous ion configurations in the K
pubmed: 27701114
pmcid: 5544905
Kopec, W. et al. Direct knock-on of desolvated ions governs strict ion selectivity in K
pubmed: 30030538
Jing, Z. et al. Thermodynamics of ion binding and occupancy in potassium channels. Chem. Sci. 12, 8920–8930 (2021).
pubmed: 34257893
pmcid: 8246295
Soniat, M. & Rick, S. W. Charge transfer effects of ions at the liquid water/vapor interface. J. Chem. Phys. 140, 184703 (2014).
pubmed: 24832295
Soniat, M. & Rick, S. W. The effects of charge transfer on the aqueous solvation of ions. J. Chem. Phys. 137, 044511 (2012).
pubmed: 22852635
Song, B. & Jiang, L. The macroscopic quantum state of ion channels: a carrier of neural information. Sci. China Mater. 64, 2572–2579 (2021).
Zhou, Y., Morais-Cabral, J. H., Kaufman, A. & MacKinnon, R. Chemistry of ion coordination and hydration revealed by a K
pubmed: 11689936
Cuello, L. G., Jogini, V., Cortes, D. M. & Perozo, E. Structural mechanism of C-type inactivation in K
pubmed: 20613835
pmcid: 3033749
Gu, R.-X. & de Groot, B. L. Central cavity dehydration as a gating mechanism of potassium channels. Nat. Commun. 14, 2178 (2023).
pubmed: 37069187
pmcid: 10110622
Zhu, Z., Chang, C., Shu, Y. & Song, B. Transition to a superpermeation phase of confined water induced by a terahertz electromagnetic wave. J. Phys. Chem. Lett. 11, 256–262 (2020).
pubmed: 31855440
Liu, X. et al. Nonthermal and reversible control of neuronal signaling and behavior by midinfrared stimulation. Proc. Natl Acad. Sci. Usa. 118, e2015685118 (2021).
pubmed: 33649213
pmcid: 7958416
Zhang, J. et al. Non-invasive, opsin-free mid-infrared modulation activates cortical neurons and accelerates associative learning. Nat. Commun. 12, 2730 (2021).
pubmed: 33980868
pmcid: 8115038
Tegmark, M. Importance of quantum decoherence in brain processes. Phys. Rev. E 61, 4194 (2000).
Köpfer, D. A. et al. Ion permeation in K
pubmed: 25324389
Søndergaard, C. R., Olsson, M. H. M., Rostkowski, M. & Jensen, J. H. Improved treatment of ligands and coupling effects in empirical calculation and rationalization of pK
pubmed: 26606496
Berneche, S. & Roux, B. The ionization state and the conformation of Glu-71 in the KcsA K
pubmed: 11806919
pmcid: 1301886
Lee, K. I. et al. Web interface for Brownian dynamics simulation of ion transport and its applications to beta-barrel pores. J. Comput. Chem. 33, 331–339 (2012).
pubmed: 22102176
Kutzner, C., Grubmüller, H., de Groot, B. L. & Zachariae, U. Computational electrophysiology: The molecular dynamics of ion channel permeation and selectivity in atomistic detail. Biophys. J. 101, 809–817 (2011).
pubmed: 21843471
pmcid: 3175076
Schutz, C. N. & Warshel, A. What are the dielectric “constants” of proteins and how to validate electrostatic models? Proteins 44, 400–417 (2001).
pubmed: 11484218
Li, L., Li, C., Zhang, Z. & Alexov, E. On the Dielectric “Constant” of Proteins: Smooth Dielectric Function for Macromolecular Modeling and Its Implementation in DelPhi. J. Chem. Theory Comput. 9, 1865–2150 (2013).
pubmed: 26583538
Zhang, Y. et al. BDF: A relativistic electronic structure program package. J. Chem. Phys. 152, 064113 (2020).
pubmed: 32061235